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Gene Symbol
CDK11B
Assay Reference Genome
Location

Chr.1:1659176 on build GRCh38
Cytoband
1p36.33
Assay ID Hs04200027_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 984

Gene Name:

 cyclin dependent kinase 11B

Gene Aliases:

 CDC2L1, CDK11, CDK11-p110, CDK11-p46, CDK11-p58, CLK-1, PITSLREA, PK58, p58, p58CDC2L1, p58CLK-1

Location:

 Chr.1:1635226-1659839 on Build GRCh38

Assay Gene Location:

 Within Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CDK11B XM_006711065.3 1 664 XP_006711128.1
XM_011542490.2 1 664 XP_011540792.1
XM_011542491.2 XP_011540793.1
XM_011542492.2 XP_011540794.1
XM_011542493.2 1 664 XP_011540795.1
XM_011542494.2 1 664 XP_011540796.1
XM_011542495.2 1 664 XP_011540797.1
XM_017002925.1 1 664 XP_016858414.1
XM_017002926.1 1 664 XP_016858415.1
XM_017002927.1 1 664 XP_016858416.1
XM_017002928.1 1 664 XP_016858417.1
AF174497.1 AAF36538.1
AK000081.1
BC139777.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv5n111 Chr.1:1575421 - 1823403 on Build GRCh38 Deletion MMP23B MIB2 CDK11B SLC35E2 FNDC10 NADK SLC35E2B GNB1 MMP23A CDK11A
dgv8n100 Chr.1:1569349 - 1741152 on Build GRCh38 Loss MMP23B MIB2 CDK11B SSU72 SLC35E2 FNDC10 SLC35E2B MMP23A CDK11A
esv3575582 Chr.1:1624086 - 1721336 on Build GRCh38 Gain MMP23B MIB2 CDK11B SLC35E2B MMP23A CDK11A
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss SKI LOC100287934 MIR6727 RNF223 B3GALT6 LOC100288069 KLHL17 VWA1 ATAD3C GABRD AGRN TNFRSF4 CPSF3L MIR6808 MIR6726 LINC01342 OR4F5 LOC107985729 SLC35E2 SLC35E2B MMP23A FAM138A LOC100288175 TMEM52 OR4F16 ACAP3 LOC105378949 MIR1302-2 SSU72 FAM87B DVL1 WASH7P LOC105378591 LOC105378589 CDK11B NOC2L MIR200B MRPL20 LOC100129534 LOC107985728 LOC100506504 ISG15 LINC01128 ANKRD65 ATAD3A MIR6723 LOC105378947 LOC729737 TAS1R3 PLEKHN1 LOC105378948 MTND1P23 MIR200A SAMD11 LOC100133331 DDX11L1 SCNN1D CPTP FAAP20 MIR6859-1 LOC100134822 FAM41C PRKCZ ATAD3B MXRA8 PERM1 MMP23B AURKAIP1 HES4 MIR6859-2 LOC105378592 TNFRSF18 LOC148413 LINC00115 TTLL10-AS1 MIR429 CCNL2 TMEM240 LOC284600 PUSL1 CALML6 C1orf159 TTLL10 LOC107984841 LOC102724312 MIB2 FNDC10 LOC102725121 GNB1 FAM132A SDF4 MTND2P28 CFAP74 UBE2J2 TMEM88B OR4F29 LOC100132287 LOC101928626 NADK MORN1 CDK11A LOC100130417
nsv1160797 Chr.1:1566216 - 1805918 on Build GRCh38 Duplication MMP23B MIB2 CDK11B SSU72 SLC35E2 FNDC10 NADK SLC35E2B GNB1 MMP23A CDK11A
dgv2e199 Chr.1:1653096 - 1721890 on Build GRCh38 Deletion CDK11B SLC35E2B MMP23A CDK11A
esv2760410 Chr.1:1565561 - 1756248 on Build GRCh38 Gain+Loss MMP23B MIB2 CDK11B SSU72 SLC35E2 FNDC10 NADK SLC35E2B MMP23A CDK11A
nsv545017 Chr.1:1615322 - 1663759 on Build GRCh38 Loss MMP23B MIB2 CDK11B SLC35E2B
esv3585007 Chr.1:1647187 - 1714507 on Build GRCh38 Loss CDK11B SLC35E2B MMP23A CDK11A
esv27786 Chr.1:1632502 - 1752267 on Build GRCh38 Gain MMP23B CDK11B SLC35E2 NADK SLC35E2B MMP23A CDK11A
nsv947410 Chr.1:1657084 - 1663827 on Build GRCh38 Duplication CDK11B SLC35E2B
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss ATAD3A LOC100287934 MIR6727 RNF223 TAS1R3 PLEKHN1 B3GALT6 LOC105378948 LOC100288069 MIR200A SAMD11 KLHL17 VWA1 SCNN1D CPTP ATAD3C FAM41C AGRN TNFRSF4 ATAD3B CPSF3L MIR6808 MXRA8 PERM1 MIR6726 LINC01342 LOC107985729 MMP23B SLC35E2 SLC35E2B MMP23A AURKAIP1 HES4 LOC100288175 TNFRSF18 LOC148413 LINC00115 TTLL10-AS1 MIR429 CCNL2 ACAP3 TMEM240 SSU72 LOC284600 FAM87B PUSL1 C1orf159 DVL1 TTLL10 LOC102724312 MIB2 CDK11B NOC2L FNDC10 MIR200B FAM132A SDF4 MRPL20 UBE2J2 LOC107985728 TMEM88B NADK ISG15 LINC01128 ANKRD65 CDK11A LOC100130417
nsv545018 Chr.1:1638499 - 1688102 on Build GRCh38 Loss CDK11B SLC35E2B
dgv3n67 Chr.1:1653920 - 1735718 on Build GRCh38 Gain CDK11B SLC35E2 SLC35E2B MMP23A CDK11A
esv2758913 Chr.1:1389149 - 2092899 on Build GRCh38 Gain+Loss ATAD3A TMEM52 LOC148413 CCNL2 LOC105378949 TMEM240 SSU72 CALML6 LOC105378591 VWA1 ATAD3C LOC102724312 LOC105378589 GABRD MIB2 CDK11B FNDC10 PRKCZ ATAD3B GNB1 MRPL20 LOC107985729 MMP23B CFAP74 SLC35E2 TMEM88B NADK SLC35E2B MMP23A ANKRD65 CDK11A

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