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Gene Symbol
CHD1L
Assay Reference Genome
Location

Chr.1:147185588 on build GRCh38
Cytoband
1q21.1
Assay ID Hs04210219_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 9557

Gene Name:

 chromodomain helicase DNA binding protein 1 like

Gene Aliases:

 ALC1, CHDL

Location:

 Chr.1:147172804-147295766 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHD1L XM_017002858.1 XP_016858347.1

Target Gene Details

Entrez Gene ID:

 2330

Gene Name:

 flavin containing monooxygenase 5

Gene Aliases:

 -

Location:

 Chr.1:147183963-147225798 on Build GRCh38

Assay Gene Location:

 Within Exon 10
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
FMO5 NM_001144829.2 NP_001138301.1
XM_005272946.4 9 3277 XP_005273003.1
XM_005272947.4 9 3021 XP_005273004.1
XM_005272948.4 9 3004 XP_005273005.1
XM_006711245.3 8 2940 XP_006711308.1
XM_011509350.2 9 3308 XP_011507652.1
XM_011509351.2 8 3040 XP_011507653.1
XM_017000801.1 8 3052 XP_016856290.1
XM_017000802.1 8 2822 XP_016856291.1
AK225739.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv327n100 Chr.1:146028214 - 148860637 on Build GRCh38 Gain NBPF12 ACP6 LOC100996763 LOC100996517 RNVU1-1 NBPF14 BCL9 LOC105371242 GJA8 CH17-408M7.1 PRKAB2 NUDT4P2 FMO5 RNU1-13P RNVU1-8 GJA5 LOC728989 LOC284561 PDIA3P1 NOTCH2NL LOC101927468 PDE4DIP RNVU1-7 RNVU1-3 CHD1L RNVU1-6 PPIAL4G LINC00624 NBPF10 LINC01138 LOC100132057 NBPF13P MIR6077 HYDIN2 LOC105371226 LOC101928979 PDZK1P1 NBPF11 GPR89B MIR5087 LOC100505824 NUDT4P1
nsv1005055 Chr.1:145642988 - 148991068 on Build GRCh38 Loss NBPF12 LOC100996763 LOC100996517 PIAS3 RNVU1-1 NBPF14 LIX1L CH17-408M7.1 NUDT4P2 FMO5 RNU1-13P RNVU1-8 GJA5 LOC284561 ANKRD34A PDIA3P1 NOTCH2NL PDE4DIP RNVU1-7 CHD1L RNVU1-6 PPIAL4G GNRHR2 LOC100132057 MIR6077 HYDIN2 LOC105371226 LOC101928979 PDZK1P1 NBPF11 PEX11B GPR89B POLR3C ITGA10 LOC100505824 ACP6 TXNIP MIR6736 BCL9 LOC105371242 NUDT17 ANKRD35 GJA8 PRKAB2 LOC728989 LOC101927468 RNF115 RNVU1-3 GPR89A LINC00624 NBPF10 LINC01138 NBPF13P POLR3GL CD160 PDZK1 MIR5087 HFE2 NUDT4P1 RBM8A
nsv1121713 Chr.1:147010816 - 147207577 on Build GRCh38 Deletion FMO5 RNVU1-8 LOC728989 PDIA3P1 NBPF13P PRKAB2 CHD1L
esv2761299 Chr.1:146068341 - 148926801 on Build GRCh38 Gain+Loss NBPF12 ACP6 LOC100996763 LOC100996517 RNVU1-1 NBPF14 BCL9 LOC105371242 GJA8 CH17-408M7.1 PRKAB2 NUDT4P2 FMO5 RNU1-13P RNVU1-8 GJA5 LOC728989 LOC284561 PDIA3P1 NOTCH2NL LOC101927468 PDE4DIP RNVU1-7 RNVU1-3 CHD1L PPIAL4G LINC00624 NBPF10 LINC01138 LOC100132057 NBPF13P MIR6077 HYDIN2 LOC105371226 PDZK1P1 NBPF11 GPR89B MIR5087 LOC100505824 NUDT4P1
nsv509457 Chr.1:145948024 - 149021821 on Build GRCh38 Insertion NBPF12 ACP6 TXNIP LOC100996763 LOC100996517 RNVU1-1 NBPF14 BCL9 LOC105371242 LIX1L GJA8 CH17-408M7.1 PRKAB2 NUDT4P2 FMO5 RNU1-13P RNVU1-8 GJA5 LOC728989 LOC284561 ANKRD34A PDIA3P1 NOTCH2NL LOC101927468 PDE4DIP RNVU1-7 RNVU1-3 CHD1L RNVU1-6 PPIAL4G LINC00624 NBPF10 LINC01138 LOC100132057 NBPF13P MIR6077 HYDIN2 LOC105371226 POLR3GL LOC101928979 PDZK1P1 NBPF11 GPR89B MIR5087 HFE2 LOC100505824 NUDT4P1
nsv1132304 Chr.1:146186094 - 148977674 on Build GRCh38 Duplication NBPF12 ACP6 LOC100996763 LOC100996517 RNVU1-1 NBPF14 BCL9 LOC105371242 GJA8 CH17-408M7.1 PRKAB2 NUDT4P2 FMO5 RNU1-13P RNVU1-8 GJA5 LOC728989 LOC284561 PDIA3P1 NOTCH2NL LOC101927468 PDE4DIP RNVU1-7 RNVU1-3 CHD1L PPIAL4G LINC00624 LINC01138 LOC100132057 NBPF13P MIR6077 HYDIN2 LOC105371226 PDZK1P1 NBPF11 GPR89B MIR5087 LOC100505824 NUDT4P1
nsv1003688 Chr.1:146036817 - 148934526 on Build GRCh38 Gain NBPF12 ACP6 LOC100996763 LOC100996517 RNVU1-1 NBPF14 BCL9 LOC105371242 GJA8 CH17-408M7.1 PRKAB2 NUDT4P2 FMO5 RNU1-13P RNVU1-8 GJA5 LOC728989 LOC284561 PDIA3P1 NOTCH2NL LOC101927468 PDE4DIP RNVU1-7 RNVU1-3 CHD1L RNVU1-6 PPIAL4G LINC00624 NBPF10 LINC01138 LOC100132057 NBPF13P MIR6077 HYDIN2 LOC105371226 LOC101928979 PDZK1P1 NBPF11 GPR89B MIR5087 LOC100505824 NUDT4P1
dgv66e199 Chr.1:146055970 - 149056514 on Build GRCh38 Deletion NBPF12 ACP6 LOC100996763 LOC100996517 RNVU1-1 NBPF9 NBPF14 BCL9 LOC105371242 GJA8 CH17-408M7.1 PRKAB2 NUDT4P2 FMO5 RNU1-13P RNVU1-8 GJA5 LOC728989 LOC284561 PDIA3P1 NOTCH2NL LOC101927468 PDE4DIP RNVU1-7 RNVU1-3 CHD1L PPIAL4G LINC00624 NBPF10 LINC01138 LOC100132057 NBPF13P MIR6077 HYDIN2 LOC105371226 LOC101928979 PDZK1P1 NBPF11 GPR89B MIR5087 LOC100505824 NUDT4P1
nsv437047 Chr.1:147171976 - 147369886 on Build GRCh38 Loss FMO5 PDIA3P1 PRKAB2 CHD1L

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