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Gene Symbol
SAMD11
Assay Reference Genome
Location

Chr.1:933205 on build GRCh38
Cytoband
1p36.33
Assay ID Hs04210927_cn
Size
Availability Made To Order
Catalog # 4400291
Price 4,505.00
Your Price
Online offer:
4505.0
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Assay Details

Target Gene Details

Entrez Gene ID:

 148398

Gene Name:

 sterile alpha motif domain containing 11

Gene Aliases:

 MRS

Location:

 Chr.1:925741-944581 on Build GRCh38

Assay Gene Location:

 Within Intron 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SAMD11 NM_152486.2 NP_689699.2
CN293867.1
CN342795.1
JX093066.1
JX093067.1
JX093068.1
JX093069.1
JX093070.1
JX093071.1
JX093072.1
JX093073.1
JX093074.1
JX093075.1
JX093076.1
JX093077.1
JX093078.1
JX093079.1
JX093080.1
JX093081.1
JX093082.1
JX093083.1
JX093084.1
JX093085.1
JX093086.1
JX093087.1
JX093088.1
JX093089.1
JX093090.1
JX093091.1
JX093092.1
JX093093.1
JX093094.1
JX093095.1
JX093096.1
JX093097.1
JX093098.1
JX093099.1
JX093100.1
JX093101.1
JX093102.1
JX093103.1
JX093104.1
JX093105.1
JX093106.1
JX093107.1
JX093108.1
JX093109.1
JX093110.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2762302 Chr.1:914637 - 1106320 on Build GRCh38 Gain C1orf159 AGRN KLHL17 SAMD11 PERM1 LOC105378948 HES4 LOC107985728 LOC284600 PLEKHN1 LOC100130417 LOC100288175 NOC2L RNF223 ISG15
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss SLC35E2B AURKAIP1 DVL1 B3GALT6 LOC105378949 MIR6859-2 CFAP74 LOC107984841 MIR6726 MORN1 MRPL20 LOC100132287 LINC01128 KLHL17 MIR429 MIR1302-2 FAM138A TTLL10-AS1 LOC284600 FAM41C PRKCZ CDK11B TMEM88B LOC105378589 VWA1 TTLL10 SCNN1D CCNL2 FAAP20 FAM132A LOC105378948 LOC100287934 LOC107985728 OR4F16 MTND2P28 LOC100130417 GABRD LOC100288069 DDX11L1 GNB1 RNF223 ISG15 MIR200B TNFRSF4 ATAD3A LOC100129534 PERM1 TNFRSF18 MIR6723 LOC105378592 OR4F5 MIB2 MIR6727 PLEKHN1 ATAD3C WASH7P C1orf159 LOC729737 TAS1R3 NOC2L NADK SSU72 LOC148413 TMEM52 LOC105378591 SDF4 MTND1P23 ATAD3B CDK11A CPSF3L FNDC10 CALML6 LINC01342 ACAP3 LOC100288175 LOC100133331 MIR6859-1 SKI AGRN SAMD11 MXRA8 OR4F29 LOC101928626 PUSL1 MMP23A MMP23B UBE2J2 ANKRD65 LOC105378947 LINC00115 MIR200A LOC102724312 CPTP HES4 LOC107985729 SLC35E2 LOC102725121 LOC100506504 LOC100134822 FAM87B TMEM240 MIR6808
nsv544904 Chr.1:929558 - 934877 on Build GRCh38 Gain SAMD11
nsv950451 Chr.1:899421 - 1094520 on Build GRCh38 Deletion C1orf159 AGRN KLHL17 SAMD11 PERM1 LOC105378948 HES4 LOC107985728 LOC284600 PLEKHN1 LOC100130417 LOC100288175 NOC2L RNF223 ISG15
nsv509035 Chr.1:891406 - 985724 on Build GRCh38 Insertion KLHL17 SAMD11 LOC284600 PLEKHN1 LOC100130417 NOC2L PERM1 LOC107985728
dgv9n54 Chr.1:925754 - 952840 on Build GRCh38 Loss SAMD11 NOC2L
nsv428334 Chr.1:874371 - 1220569 on Build GRCh38 Gain C1orf159 AGRN SAMD11 LOC105378948 LOC107985728 LOC100130417 NOC2L RNF223 ISG15 MIR200B TNFRSF4 SDF4 MIR200A KLHL17 MIR429 PERM1 TNFRSF18 HES4 TTLL10-AS1 LINC01342 LOC284600 FAM41C PLEKHN1 LOC100288175 TTLL10
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss SLC35E2B AURKAIP1 C1orf159 DVL1 B3GALT6 TAS1R3 MIR6726 NOC2L NADK SSU72 LOC148413 MRPL20 SDF4 LINC01128 KLHL17 ATAD3B CDK11A MIR429 CPSF3L FNDC10 TTLL10-AS1 LINC01342 LOC284600 FAM41C ACAP3 LOC100288175 CDK11B TMEM88B VWA1 TTLL10 SCNN1D CCNL2 AGRN SAMD11 MXRA8 FAM132A LOC105378948 LOC100287934 PUSL1 LOC107985728 MMP23A LOC100130417 MMP23B LOC100288069 RNF223 ISG15 UBE2J2 MIR200B TNFRSF4 ANKRD65 ATAD3A LINC00115 MIR200A LOC102724312 PERM1 TNFRSF18 CPTP HES4 MIB2 LOC107985729 MIR6727 PLEKHN1 SLC35E2 ATAD3C FAM87B TMEM240 MIR6808
dgv5n100 Chr.1:585989 - 1114424 on Build GRCh38 Gain C1orf159 AGRN SAMD11 LOC105378948 LOC101928626 LOC100287934 LOC107985728 OR4F16 LOC107984841 MTND2P28 LOC100130417 NOC2L LOC100288069 RNF223 ISG15 LOC105378947 LINC00115 MTND1P23 LINC01128 KLHL17 PERM1 MIR6723 HES4 LOC284600 FAM41C PLEKHN1 LOC100288175 LOC100133331 FAM87B
nsv517709 Chr.1:817186 - 1275912 on Build GRCh38 Gain+Loss C1orf159 AGRN SAMD11 B3GALT6 FAM132A LOC105378948 LOC107985728 LOC100130417 NOC2L RNF223 ISG15 UBE2J2 MIR200B TNFRSF4 LINC00115 SDF4 LINC01128 MIR200A KLHL17 MIR429 PERM1 TNFRSF18 HES4 TTLL10-AS1 LINC01342 LOC284600 FAM41C PLEKHN1 LOC100288175 TTLL10 FAM87B
dgv1n111 Chr.1:690090 - 939522 on Build GRCh38 Duplication LINC00115 LINC01128 SAMD11 LOC100287934 LOC107985728 OR4F16 LOC284600 FAM41C LOC107984841 LOC100130417 LOC100288069 LOC100133331 FAM87B
dgv3n111 Chr.1:783283 - 939522 on Build GRCh38 Duplication LINC00115 LINC01128 SAMD11 LOC284600 FAM41C LOC100130417 LOC100287934 FAM87B LOC107985728
dgv6n54 Chr.1:917392 - 934930 on Build GRCh38 Loss SAMD11 LOC284600 LOC100130417 LOC107985728
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain AURKAIP1 C1orf159 CCNL2 AGRN SAMD11 DVL1 B3GALT6 MXRA8 FAM132A LOC105378948 PUSL1 LOC107985728 TAS1R3 LOC100130417 MIR6726 NOC2L LOC148413 RNF223 ISG15 UBE2J2 MIR200B TNFRSF4 ANKRD65 MRPL20 SDF4 MIR200A KLHL17 MIR429 CPSF3L PERM1 TNFRSF18 CPTP HES4 TTLL10-AS1 LINC01342 MIR6727 LOC284600 ACAP3 PLEKHN1 LOC100288175 TMEM88B TTLL10 MIR6808 SCNN1D
nsv544898 Chr.1:924665 - 943937 on Build GRCh38 Gain SAMD11 LOC107985728
nsv832980 Chr.1:848279 - 1007037 on Build GRCh38 Gain LINC01128 KLHL17 SAMD11 LOC284600 FAM41C PLEKHN1 LOC100130417 NOC2L PERM1 HES4 LOC107985728

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:


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