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Gene Symbol
CHD1L
Assay Reference Genome
Location

Chr.1:147200646 on build GRCh38
Cytoband
1q21.1
Assay ID Hs04211070_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 9557

Gene Name:

 chromodomain helicase DNA binding protein 1 like

Gene Aliases:

 ALC1, CHDL

Location:

 Chr.1:147172804-147295766 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHD1L XM_017002858.1 XP_016858347.1

Target Gene Details

Entrez Gene ID:

 2330

Gene Name:

 flavin containing monooxygenase 5

Gene Aliases:

 -

Location:

 Chr.1:147183963-147225798 on Build GRCh38

Assay Gene Location:

 Within Intron 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
FMO5 NM_001144829.2 NP_001138301.1
NM_001144830.2 NP_001138302.1
NM_001461.3 NP_001452.2
XM_005272946.4 XP_005273003.1
XM_005272947.4 XP_005273004.1
XM_005272948.4 XP_005273005.1
XM_006711245.3 XP_006711308.1
XM_011509350.2 XP_011507652.1
XM_011509351.2 XP_011507653.1
XM_017000801.1 XP_016856290.1
XM_017000802.1 XP_016856291.1
AK222728.1 BAD96448.1
AK225739.1
AK314647.1
BC035687.1 AAH35687.1
L37080.1 AAA67849.1
Z47553.1 CAA87633.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv327n100 Chr.1:146028214 - 148860637 on Build GRCh38 Gain LOC100996763 LOC105371242 NBPF11 HYDIN2 PDIA3P1 RNVU1-6 LINC00624 RNVU1-3 LINC01138 GJA5 ACP6 LOC284561 CHD1L PPIAL4G RNU1-13P RNVU1-7 NBPF12 BCL9 PRKAB2 LOC101928979 MIR5087 CH17-408M7.1 LOC100505824 LOC728989 NBPF14 NOTCH2NL LOC105371226 FMO5 NUDT4P1 RNVU1-8 LOC100996517 PDZK1P1 GPR89B RNVU1-1 NBPF13P LOC100132057 NBPF10 PDE4DIP LOC101927468 NUDT4P2 MIR6077 GJA8
nsv1005055 Chr.1:145642988 - 148991068 on Build GRCh38 Loss PEX11B LOC100996763 LOC105371242 GPR89A NBPF11 ITGA10 RNVU1-6 RNVU1-3 LINC01138 LOC284561 RNU1-13P RNVU1-7 NBPF12 BCL9 PRKAB2 LIX1L LOC101928979 CH17-408M7.1 LOC100505824 CD160 POLR3C NUDT17 RNVU1-8 RBM8A TXNIP LOC100996517 PDZK1P1 POLR3GL GPR89B RNVU1-1 NBPF13P PDE4DIP HYDIN2 PDIA3P1 GNRHR2 LINC00624 GJA5 ACP6 MIR6736 CHD1L PDZK1 PPIAL4G PIAS3 MIR5087 ANKRD35 LOC728989 NBPF14 NOTCH2NL LOC105371226 FMO5 NUDT4P1 HFE2 ANKRD34A LOC100132057 NBPF10 LOC101927468 NUDT4P2 RNF115 MIR6077 GJA8
nsv1121713 Chr.1:147010816 - 147207577 on Build GRCh38 Deletion LOC728989 CHD1L NBPF13P PDIA3P1 FMO5 RNVU1-8 PRKAB2
esv2761299 Chr.1:146068341 - 148926801 on Build GRCh38 Gain+Loss LOC100996763 LOC105371242 NBPF11 HYDIN2 PDIA3P1 LINC00624 RNVU1-3 LINC01138 GJA5 ACP6 LOC284561 CHD1L PPIAL4G RNU1-13P RNVU1-7 NBPF12 BCL9 PRKAB2 MIR5087 CH17-408M7.1 LOC100505824 LOC728989 NBPF14 NOTCH2NL LOC105371226 FMO5 NUDT4P1 RNVU1-8 LOC100996517 PDZK1P1 GPR89B RNVU1-1 NBPF13P LOC100132057 NBPF10 PDE4DIP LOC101927468 NUDT4P2 MIR6077 GJA8
nsv509457 Chr.1:145948024 - 149021821 on Build GRCh38 Insertion LOC100996763 LOC105371242 NBPF11 HYDIN2 PDIA3P1 RNVU1-6 LINC00624 RNVU1-3 LINC01138 GJA5 ACP6 LOC284561 CHD1L PPIAL4G RNU1-13P RNVU1-7 NBPF12 BCL9 PRKAB2 LIX1L LOC101928979 MIR5087 CH17-408M7.1 LOC100505824 LOC728989 NBPF14 NOTCH2NL LOC105371226 FMO5 NUDT4P1 RNVU1-8 HFE2 ANKRD34A TXNIP LOC100996517 PDZK1P1 POLR3GL GPR89B RNVU1-1 NBPF13P LOC100132057 NBPF10 PDE4DIP LOC101927468 NUDT4P2 MIR6077 GJA8
nsv1132304 Chr.1:146186094 - 148977674 on Build GRCh38 Duplication LOC100996763 LOC105371242 NBPF11 HYDIN2 PDIA3P1 LINC00624 RNVU1-3 LINC01138 GJA5 ACP6 LOC284561 CHD1L PPIAL4G RNU1-13P RNVU1-7 NBPF12 BCL9 PRKAB2 MIR5087 CH17-408M7.1 LOC100505824 LOC728989 NBPF14 NOTCH2NL LOC105371226 FMO5 NUDT4P1 RNVU1-8 LOC100996517 PDZK1P1 GPR89B RNVU1-1 NBPF13P LOC100132057 PDE4DIP LOC101927468 NUDT4P2 MIR6077 GJA8
nsv1003688 Chr.1:146036817 - 148934526 on Build GRCh38 Gain LOC100996763 LOC105371242 NBPF11 HYDIN2 PDIA3P1 RNVU1-6 LINC00624 RNVU1-3 LINC01138 GJA5 ACP6 LOC284561 CHD1L PPIAL4G RNU1-13P RNVU1-7 NBPF12 BCL9 PRKAB2 LOC101928979 MIR5087 CH17-408M7.1 LOC100505824 LOC728989 NBPF14 NOTCH2NL LOC105371226 FMO5 NUDT4P1 RNVU1-8 LOC100996517 PDZK1P1 GPR89B RNVU1-1 NBPF13P LOC100132057 NBPF10 PDE4DIP LOC101927468 NUDT4P2 MIR6077 GJA8
dgv66e199 Chr.1:146055970 - 149056514 on Build GRCh38 Deletion LOC100996763 LOC105371242 NBPF11 HYDIN2 PDIA3P1 LINC00624 RNVU1-3 LINC01138 GJA5 ACP6 LOC284561 CHD1L PPIAL4G RNU1-13P RNVU1-7 NBPF12 BCL9 PRKAB2 LOC101928979 MIR5087 CH17-408M7.1 LOC100505824 LOC728989 NBPF14 NOTCH2NL LOC105371226 FMO5 NUDT4P1 RNVU1-8 NBPF9 LOC100996517 PDZK1P1 GPR89B RNVU1-1 NBPF13P LOC100132057 NBPF10 PDE4DIP LOC101927468 NUDT4P2 MIR6077 GJA8
nsv437047 Chr.1:147171976 - 147369886 on Build GRCh38 Loss CHD1L PDIA3P1 FMO5 PRKAB2

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