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See other KDM1A CNV Assays ›
Gene Symbol
KDM1A
Assay Reference Genome
Location

Chr.1:23038191 on build GRCh38
Cytoband
1p36.12
Assay ID Hs04525157_cn
Size
Availability Made To Order
Catalog # 4400291
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Target Gene Details

Entrez Gene ID:

23028

Gene Name:

lysine demethylase 1A

Gene Aliases:

AOF2, BHC110, CPRF, KDM1, LSD1

Location:

Chr.1:23019443-23083691 on Build GRCh38

Assay Gene Location:

Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
KDM1A NM_001009999.2 NP_001009999.1
NM_015013.3 NP_055828.2
XM_005245786.2 XP_005245843.1
XM_006710472.3 XP_006710535.1
XM_006710473.2 XP_006710536.1
XM_006710474.3 XP_006710537.1
XM_017000716.1 XP_016856205.1
XM_017000717.1 XP_016856206.1
XM_017000718.1 XP_016856207.1
XM_017000719.1 XP_016856208.1
XM_017000720.1 XP_016856209.1
AB011173.1
AK290328.1
BC040194.2 AAH40194.3
BC048134.1 AAH48134.2

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More Information


Set Membership:

Intragenic Intronic Non-exonic non-DGV Variation

Panther Classification:

Molecular Function -

oxidase

Gene Ontology Categories:

Function(s) Process(es)

negative regulation of transcription from RNA polymerase II promoter
in utero embryonic development
transcription, DNA-templated
regulation of transcription from RNA polymerase II promoter
protein demethylation
blood coagulation
cell proliferation
regulation of double-strand break repair via homologous recombination
regulation of primitive erythrocyte differentiation
histone deacetylation
pituitary gland development
granulocyte differentiation
negative regulation of protein binding
histone H3-K9 demethylation
positive regulation of histone ubiquitination
cellular response to UV
histone H3-K4 demethylation
negative regulation of DNA binding
negative regulation of sequence-specific DNA binding transcription factor activity
negative regulation of DNA damage response, signal transduction by p53 class mediator
positive regulation of erythrocyte differentiation
positive regulation of megakaryocyte differentiation
negative regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
positive regulation of hormone biosynthetic process
positive regulation of sequence-specific DNA binding transcription factor activity
negative regulation of histone H3-K4 methylation
negative regulation of histone H3-K9 methylation
muscle cell development
oxidation-reduction process
cellular response to gamma radiation
negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
regulation of cellular protein localization
positive regulation of neural precursor cell proliferation
positive regulation of stem cell proliferation
RNA polymerase II transcription factor binding
p53 binding
chromatin binding
transcription factor activity, sequence-specific DNA binding
histone deacetylase activity
protein binding
transcription factor binding
oxidoreductase activity
enzyme binding
ligand-dependent nuclear receptor transcription coactivator activity
demethylase activity
histone demethylase activity
histone demethylase activity (H3-K4 specific)
histone demethylase activity (H3-K9 specific)
histone demethylase activity (H3-dimethyl-K4 specific)
telomeric DNA binding
MRF binding
transcription regulatory region DNA binding
flavin adenine dinucleotide binding
androgen receptor binding
telomeric repeat-containing RNA binding

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