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See other HSPD1 CNV Assays ›
Gene Symbol
HSPD1
Assay Reference Genome
Location

Chr.2:197489010 on build GRCh38
Cytoband
2q33.1
Assay ID Hs04686921_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Target Gene Details

Entrez Gene ID:

3329

Gene Name:

heat shock protein family D (Hsp60) member 1

Gene Aliases:

CPN60, GROEL, HLD4, HSP-60, HSP60, HSP65, HuCHA60, SPG13

Location:

Chr.2:197486584-197500274 on Build GRCh38

Assay Gene Location:

Overlaps Intron 10 - Exon 10
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
HSPD1 NM_002156.4 NP_002147.2
NM_199440.1 NP_955472.1
AK298368.1
AK298632.1
AK298844.1
AK312240.1
BC002676.2 AAH02676.1
BC003030.1 AAH03030.1
BC067082.1 AAH67082.1
BC073746.1 AAH73746.1
BX647145.1
EU719626.1
KU178139.1
KU178140.1
KU178141.1
M22382.1 AAA60127.1
M34664.1 AAA36022.1

Target Copy Number Variation Details

DGV Version:

Release date: 2016-05-15, GRCh GRCh38
Target
Variation
Location CNV
Subtype
Genes
nsv963757 Chr.2:197486354 - 197489175 on Build GRCh38 Duplication HSPD1 SNORA105B
nsv1014881 Chr.2:197432432 - 197668882 on Build GRCh38 Gain RFTN2 HSPE1 MOB4 HSPD1 HSPE1-MOB4 COQ10B SF3B1 SNORA105B

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More Information


Set Membership:

Intragenic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)

B cell cytokine production
MyD88-dependent toll-like receptor signaling pathway
positive regulation of T cell mediated immune response to tumor cell
'de novo' protein folding
activation of cysteine-type endopeptidase activity involved in apoptotic process
response to unfolded protein
response to cold
viral process
positive regulation of interferon-alpha production
positive regulation of interferon-gamma production
positive regulation of interleukin-10 production
positive regulation of interleukin-12 production
positive regulation of interleukin-6 production
protein refolding
B cell proliferation
T cell activation
B cell activation
positive regulation of macrophage activation
positive regulation of apoptotic process
negative regulation of apoptotic process
isotype switching to IgG isotypes
protein stabilization
positive regulation of T cell activation
chaperone-mediated protein complex assembly
protein maturation
lipopolysaccharide binding
p53 binding
DNA replication origin binding
single-stranded DNA binding
double-stranded RNA binding
protein binding
ATP binding
ATPase activity
ubiquitin protein ligase binding
poly(A) RNA binding
unfolded protein binding
chaperone binding

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