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See other ESRRA CNV Assays ›
Gene Symbol
ESRRA
Assay Reference Genome
Location

Chr.11:64314202 on build GRCh38
Cytoband
11q13.1
Assay ID Hs05238784_cn
Size
Availability Made To Order
Catalog # 4400291
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Target Gene Details

Entrez Gene ID:

2101

Gene Name:

estrogen related receptor alpha

Gene Aliases:

ERR1, ERRa, ERRalpha, ESRL1, NR3B1

Location:

Chr.11:64305528-64316743 on Build GRCh38

Assay Gene Location:

Overlaps Intron 4 - Exon 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ESRRA NM_001282450.1 NP_001269379.1
NM_001282451.1 NP_001269380.1
NM_004451.4 NP_004442.3
XM_017017313.1 XP_016872802.1
BC007915.2 AAH07915.2
BC033701.1 AAH33701.1
BC063795.1
BC073956.1 AAH73956.1
BC092470.1 AAH92470.1
BC093720.1 AAH93720.1
BC093722.1 AAH93722.1
HQ692867.1
L38487.1 AAB17015.1

Target Copy Number Variation Details

DGV Version:

Release date: 2016-05-15, GRCh GRCh38
Target
Variation
Location CNV
Subtype
Genes
nsv951010 Chr.11:63942829 - 64352128 on Build GRCh38 Deletion PRDX5 ESRRA LOC105369340 COX8A TRPT1 NAA40 VEGFB OTUB1 PPP1R14B MIR7155 NUDT22 CCDC88B TRMT112 KCNK4-TEX40 MACROD1 FERMT3 TEX40 DNAJC4 PLCB3 KCNK4 FKBP2 GPR137 BAD STIP1 FLRT1
dgv1963n54 Chr.11:64174262 - 64329761 on Build GRCh38 Loss PRDX5 ESRRA KCNK4-TEX40 LOC105369340 TRPT1 FERMT3 TEX40 VEGFB DNAJC4 PLCB3 KCNK4 FKBP2 PPP1R14B GPR137 BAD NUDT22 STIP1 TRMT112
nsv832186 Chr.11:64204788 - 64402587 on Build GRCh38 Loss PRDX5 ESRRA KCNK4-TEX40 LOC105369340 TRPT1 RPS6KA4 FERMT3 TEX40 VEGFB DNAJC4 PLCB3 KCNK4 FKBP2 MIR1237 PPP1R14B MIR7155 GPR137 BAD NUDT22 CCDC88B TRMT112
nsv469961 Chr.11:64055468 - 64318495 on Build GRCh38 Loss PRDX5 ESRRA KCNK4-TEX40 LOC105369340 TRPT1 MACROD1 FERMT3 TEX40 VEGFB DNAJC4 PLCB3 KCNK4 FKBP2 PPP1R14B GPR137 BAD NUDT22 STIP1 TRMT112 FLRT1

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More Information


Set Membership:

Intragenic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)

negative regulation of transcription from RNA polymerase II promoter
regulation of transcription, DNA-templated
transcription initiation from RNA polymerase II promoter
mitochondrion organization
intracellular receptor signaling pathway
response to estradiol
regulation of cell proliferation
steroid hormone mediated signaling pathway
regulation of osteoblast differentiation
regulation of osteoclast differentiation
positive regulation of transcription from RNA polymerase II promoter
cartilage development
positive regulation of cellular response to insulin stimulus
RNA polymerase II core promoter proximal region sequence-specific DNA binding
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding
DNA binding
steroid hormone receptor activity
RNA polymerase II transcription factor activity, ligand-activated sequence-specific DNA binding
steroid binding
protein binding
zinc ion binding
protein domain specific binding
sequence-specific DNA binding

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