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See other SCP2 CNV Assays ›
Gene Symbol
SCP2
Assay Reference Genome
Location

Chr.1:52938500 on build GRCh38
Cytoband
1p32.3
Assay ID Hs05736326_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Target Gene Details

Entrez Gene ID:

6342

Gene Name:

sterol carrier protein 2

Gene Aliases:

NLTP, NSL-TP, SCP-2, SCP-CHI, SCP-X, SCPX

Location:

Chr.1:52927229-53051617 on Build GRCh38

Assay Gene Location:

Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SCP2 NM_001007098.2 NP_001007099.1
NM_001193599.1 NP_001180528.1
NM_001193600.1 NP_001180529.1
NM_001193617.1 NP_001180546.1
NM_002979.4 NP_002970.2
XM_005271103.4 XP_005271160.1
XM_011541935.2 XP_011540237.1
XM_017002045.1 XP_016857534.1
AB208789.1 BAD92026.1
AK294631.1
AK295214.1
AK308105.1
AK312856.1
BC067108.1 AAH67108.1
DC330171.1
M75883.1 AAA03557.1

Target Copy Number Variation Details

DGV Version:

Release date: 2016-05-15, GRCh GRCh38
Target
Variation
Location CNV
Subtype
Genes
nsv1001535 Chr.1:52620368 - 53346539 on Build GRCh38 Gain COA7 CPT2 MIR1273F MIR1273G FAM159A ECHDC2 MAGOH LOC100507564 LOC105378732 MIR5095 PODN SCP2 C1orf123 SLC1A7 ZYG11B LRP8 ZYG11A

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More Information


Set Membership:

Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

acyltransferase transfer/carrier protein

Gene Ontology Categories:

Function(s) Process(es)

bile acid biosynthetic process
peroxisome organization
sterol transport
positive regulation of intracellular cholesterol transport
fatty acid beta-oxidation using acyl-CoA oxidase
alpha-linolenic acid metabolic process
lipid hydroperoxide transport
fatty-acyl-CoA binding
receptor binding
protein binding
sterol transporter activity
cholesterol binding
propanoyl-CoA C-acyltransferase activity
long-chain fatty acyl-CoA binding
propionyl-CoA C2-trimethyltridecanoyltransferase activity
oleic acid binding

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