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See other ARID1A CNV Assays ›
Gene Symbol
ARID1A
Assay Reference Genome
Location

Chr.1:26713006 on build GRCh38
Cytoband
1p36.11
Assay ID Hs05767366_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Target Gene Details

Entrez Gene ID:

8289

Gene Name:

AT-rich interaction domain 1A

Gene Aliases:

B120, BAF250, BAF250a, BM029, C1orf4, CSS2, ELD, MRD14, OSA1, P270, SMARCF1, hELD, hOSA1

Location:

Chr.1:26696031-26782110 on Build GRCh38

Assay Gene Location:

Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ARID1A NM_006015.4 NP_006006.3
NM_139135.2 NP_624361.1
AB210022.1 BAE06104.1
AF219114.1 AAG17549.2
AF231056.1 AAG33967.1
AF265208.1 AAF75765.1
AF521670.1 AAN03446.1

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More Information


Set Membership:

Intragenic Intronic Non-exonic non-DGV Variation

Gene Ontology Categories:

Function(s) Process(es)

negative regulation of transcription from RNA polymerase II promoter
neural tube closure
cardiac chamber development
optic cup formation involved in camera-type eye development
nucleosome disassembly
chromatin remodeling
maintenance of chromatin silencing
transcription, DNA-templated
regulation of transcription from RNA polymerase II promoter
covalent chromatin modification
intracellular estrogen receptor signaling pathway
androgen receptor signaling pathway
forebrain development
nucleosome mobilization
glucocorticoid receptor signaling pathway
ATP-dependent chromatin remodeling
positive regulation of transcription, DNA-templated
chromatin-mediated maintenance of transcription
cardiac muscle cell differentiation
placenta blood vessel development
toxin transport
DNA binding
transcription coactivator activity
protein binding
ligand-dependent nuclear receptor binding
nucleosome binding

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