Hs06514677_cn

• Gene Symbol: SPEN
• Assay Reference Genome Location: Chr.1:15851496 on build GRCh38
• Cytoband: 1p36.21

Target Gene Details

• Entrez Gene ID: 23013
• Gene Name: spen family transcriptional repressor
• Gene Aliases: HIAA0929, MINT, RBM15C, SHARP
• Location: Chr.1:15847864-15940455 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SPEN	NM_015001.2			NP_055816.2
	AF356524.1			AAK52750.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1011969	Chr.1:15826990 - 15875045 on Build GRCh38	Gain+Loss	FLJ37453 SPEN
nsv833647	Chr.1:15794042 - 15952334 on Build GRCh38	Loss	UQCRHL FLJ37453 ZBTB17 SPEN
dgv37n100	Chr.1:15823408 - 15924038 on Build GRCh38	Gain	FLJ37453 SPEN
esv2764241	Chr.1:15827002 - 15855150 on Build GRCh38	Loss	FLJ37453 SPEN
nsv3409	Chr.1:15809988 - 15852694 on Build GRCh38	Deletion	FLJ37453 SPEN
dgv38n100	Chr.1:15839166 - 15924038 on Build GRCh38	Gain	FLJ37453 SPEN

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

RNA metabolism protein

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
mRNA splicing, via spliceosome
transcription, DNA-templated
Notch signaling pathway
viral process
negative regulation of transcription, DNA-templated
positive regulation of neurogenesis

Function(s)

nucleotide binding
RNA polymerase II transcription factor binding
transcriptional repressor activity, RNA polymerase II transcription factor binding
nucleic acid binding
DNA binding
protein binding
poly(A) RNA binding