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Gene Symbol
MIB2
Assay Reference Genome
Location

Chr.1:1618185 on build GRCh38
Cytoband
1p36.33
Assay ID Hs07477031_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 142678

Gene Name:

 mindbomb E3 ubiquitin protein ligase 2

Gene Aliases:

 ZZANK1, ZZZ5

Location:

 Chr.1:1615188-1630610 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
MIB2 NM_001170686.1 NP_001164157.1
NM_001170687.1 NP_001164158.1
NM_001170688.1 NP_001164159.1
NM_001170689.1 NP_001164160.1
NM_080875.2 NP_543151.2
NR_033183.1
XM_006710372.1 XP_006710435.1
XM_011540731.2 XP_011539033.1
XM_011540736.2 XP_011539038.1
XM_011540737.2 XP_011539039.1
XM_011540741.2 XP_011539043.1
XM_011540742.2 XP_011539044.1
XM_017000349.1 XP_016855838.1
XM_017000350.1 XP_016855839.1
XM_017000351.1 XP_016855840.1
XM_017000352.1 XP_016855841.1
XM_017000353.1 XP_016855842.1
XM_017000354.1 XP_016855843.1
XM_017000355.1 XP_016855844.1
XM_017000356.1 XP_016855845.1
XM_017000357.1 XP_016855846.1
XM_017000358.1 XP_016855847.1
XM_017000359.1 XP_016855848.1
XM_017000360.1 XP_016855849.1
XM_017000361.1 XP_016855850.1
XM_017000362.1 XP_016855851.1
XM_017000363.1 XP_016855852.1
XM_017000364.1 XP_016855853.1
XM_017000365.1 XP_016855854.1
XM_017000366.1 XP_016855855.1
AB074480.1 BAB92950.1
AB076691.1 BAC00992.1
AB076692.1 BAC00993.1
AB076693.1 BAC00994.1
AB097000.1 BAC77353.1
AK098785.1 BAC05413.1
AK122751.1
AK122863.1
AK123400.1 2 1796
AK128167.1
AK128553.1
AK293642.1
AK302757.1
AK309362.1
BC016490.1 AAH16490.1
BC037542.1 AAH37542.1
DA391220.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv5n111 Chr.1:1575421 - 1823403 on Build GRCh38 Deletion NADK MIB2 CDK11B MMP23A SLC35E2B CDK11A MMP23B FNDC10 GNB1 SLC35E2
dgv8n100 Chr.1:1569349 - 1741152 on Build GRCh38 Loss MIB2 CDK11B MMP23A SLC35E2B CDK11A MMP23B FNDC10 SSU72 SLC35E2
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss LOC284600 HES4 MRPL20 CPTP LOC107985728 CDK11B VWA1 FAM41C ANKRD65 LINC01342 RNF223 LOC100287934 UBE2J2 MXRA8 PERM1 NOC2L ATAD3C MIR6727 SLC35E2 LOC148413 C1orf159 CPSF3L MMP23B MIR429 SSU72 MIB2 LOC102724312 AURKAIP1 TTLL10 SDF4 MIR200A LINC00115 LOC105378948 LOC107985729 FAM132A MIR200B PLEKHN1 KLHL17 TAS1R3 AGRN NADK LOC100288175 LOC100130417 SAMD11 MIR6726 CDK11A CCNL2 FNDC10 TNFRSF4 LOC100288069 TNFRSF18 SCNN1D ISG15 MMP23A ATAD3A LINC01128 TMEM88B TTLL10-AS1 MIR6808 ACAP3 TMEM240 FAM87B B3GALT6 PUSL1 SLC35E2B DVL1 ATAD3B
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss HES4 CPTP LOC105378949 LOC107985728 VWA1 GNB1 LOC100287934 PERM1 LOC100506504 CALML6 LOC729737 SKI LOC105378592 LOC100133331 C1orf159 MMP23B LOC102725121 SSU72 CFAP74 DDX11L1 MIB2 AURKAIP1 MIR200A LOC107985729 FAM132A MIR200B LOC100132287 KLHL17 MIR1302-2 LOC100288175 LOC100130417 SAMD11 LOC107984841 MIR6859-2 CCNL2 FAM138A LOC100288069 OR4F16 SCNN1D ISG15 ATAD3A LINC01128 TMEM88B TTLL10-AS1 MIR6808 MTND2P28 FAM87B MIR6723 PUSL1 ATAD3B LOC284600 MRPL20 FAAP20 CDK11B LOC100134822 FAM41C ANKRD65 LINC01342 RNF223 UBE2J2 MXRA8 NOC2L LOC105378591 ATAD3C MIR6727 SLC35E2 LOC148413 MTND1P23 PRKCZ CPSF3L MIR429 LOC102724312 TTLL10 LOC105378947 SDF4 LOC105378589 LINC00115 LOC105378948 PLEKHN1 TAS1R3 MIR6859-1 AGRN LOC101928626 TMEM52 NADK MIR6726 CDK11A FNDC10 GABRD TNFRSF4 OR4F29 TNFRSF18 OR4F5 MMP23A ACAP3 WASH7P TMEM240 MORN1 B3GALT6 LOC100129534 SLC35E2B DVL1
nsv1160797 Chr.1:1566216 - 1805918 on Build GRCh38 Duplication NADK MIB2 CDK11B MMP23A SLC35E2B CDK11A MMP23B FNDC10 GNB1 SSU72 SLC35E2
nsv950452 Chr.1:1106921 - 1637538 on Build GRCh38 Deletion LOC107985729 MRPL20 CPTP FAM132A MIR200B CDK11B VWA1 ANKRD65 LINC01342 TAS1R3 UBE2J2 MXRA8 ATAD3C MIR6726 CCNL2 FNDC10 MIR6727 TNFRSF4 LOC148413 TNFRSF18 SCNN1D C1orf159 ATAD3A TMEM88B TTLL10-AS1 MIR6808 CPSF3L MMP23B ACAP3 MIR429 SSU72 TMEM240 MIB2 LOC102724312 AURKAIP1 B3GALT6 TTLL10 PUSL1 SDF4 DVL1 ATAD3B MIR200A
esv2760410 Chr.1:1565561 - 1756248 on Build GRCh38 Gain+Loss NADK MIB2 CDK11B MMP23A SLC35E2B CDK11A MMP23B FNDC10 SSU72 SLC35E2
nsv545017 Chr.1:1615322 - 1663759 on Build GRCh38 Loss MIB2 CDK11B SLC35E2B MMP23B
esv2758913 Chr.1:1389149 - 2092899 on Build GRCh38 Gain+Loss LOC107985729 MRPL20 LOC105378949 CDK11B VWA1 ANKRD65 GNB1 TMEM52 NADK CALML6 LOC105378591 ATAD3C CDK11A CCNL2 FNDC10 GABRD SLC35E2 LOC148413 MMP23A ATAD3A TMEM88B PRKCZ MMP23B SSU72 CFAP74 TMEM240 MIB2 LOC102724312 SLC35E2B ATAD3B LOC105378589

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More Information


Additional Information:

For this assay, SNP(s) [rs142389064] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

ubiquitin-protein ligase

Gene Ontology Categories:

Function(s) Process(es)


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