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See other ALYREF CNV Assays ›
Gene Symbol
ALYREF
Assay Reference Genome
Location

Chr.17:81890060 on build GRCh38
Cytoband
17q25.3
Assay ID Hs07502923_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 10189

Gene Name:

 Aly/REF export factor

Gene Aliases:

 ALY, ALY/REF, BEF, REF, THOC4

Location:

 Chr.17:81887835-81891622 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ALYREF NM_005782.3 NP_005773.3
AF047002.1 AAD09608.1
AF086513.1
BC052302.1 AAH52302.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv33475 Chr.17:81871555 - 81891535 on Build GRCh38 Gain+Loss ANAPC11 ALYREF
esv3641407 Chr.17:81858294 - 81890680 on Build GRCh38 Gain ARHGDIA ALYREF P4HB
nsv952392 Chr.17:81885825 - 82065724 on Build GRCh38 Deletion DCXR PYCR1 MYADML2 PCYT2 RFNG ASPSCR1 RAC3 MAFG STRA13 NPB GPS1 DUS1L ANAPC11 NOTUM MAFG-AS1 LRRC45 SIRT7 ALYREF
nsv428351 Chr.17:81152631 - 83064073 on Build GRCh38 Gain TSPAN10 DCXR LOC100130370 SNORD134 FAAP100 RAB40B RFNG MIR6787 FOXK2 LOC101929552 CEP131 C17orf62 MAFG AATK-AS1 CD7 MIR4740 C17orf89 HEXDC GPS1 MIR3186 DUS1L ANAPC11 BAHCC1 TEX19 TBCD LOC105371925 TMEM105 ARHGDIA UTS2R SLC16A3 RAC3 LOC105376791 LOC101929511 CCDC57 HGS MAFG-AS1 SIRT7 MRPL12 P4HB B3GNTL1 ARL16 PYCR1 PDE6G ZNF750 LINC00482 AATK TEPSIN FN3K LOC105376790 STRA13 FN3KRP OXLD1 PPP1R27 FASN MCRIP1 FSCN2 LOC105371944 NOTUM ALYREF OGFOD3 MIR6786 MIR4525 MYADML2 PCYT2 GCGR WDR45B ASPSCR1 CSNK1D SECTM1 SLC38A10 NPB SLC25A10 ACTG1 NARF LRRC45 CCDC137 NPLOC4
nsv470620 Chr.17:81516973 - 82064485 on Build GRCh38 Loss ARL16 TSPAN10 DCXR PYCR1 PDE6G FAAP100 RFNG MAFG STRA13 OXLD1 GPS1 PPP1R27 DUS1L ANAPC11 MCRIP1 FSCN2 NOTUM ALYREF MIR6786 MYADML2 PCYT2 GCGR ARHGDIA ASPSCR1 RAC3 NPB SLC25A10 HGS MAFG-AS1 LRRC45 CCDC137 NPLOC4 SIRT7 MRPL12 P4HB
nsv833569 Chr.17:81838937 - 82011412 on Build GRCh38 Loss PYCR1 MYADML2 PCYT2 ARHGDIA ASPSCR1 MAFG NPB ANAPC11 NOTUM MAFG-AS1 SIRT7 ALYREF P4HB
esv21913 Chr.17:81828123 - 83103548 on Build GRCh38 Gain+Loss DCXR SNORD134 RAB40B RFNG MIR6787 FOXK2 LOC101929552 C17orf62 MAFG CD7 HEXDC GPS1 DUS1L ANAPC11 METRNL TEX19 TBCD ARHGDIA UTS2R SLC16A3 RAC3 LOC105376791 LOC101929511 CCDC57 MAFG-AS1 SIRT7 P4HB B3GNTL1 PYCR1 ZNF750 FN3K LOC105376790 STRA13 FN3KRP PPP1R27 FASN MCRIP1 LOC105371944 NOTUM ALYREF OGFOD3 MIR4525 MYADML2 PCYT2 WDR45B ASPSCR1 CSNK1D SECTM1 NPB NARF LRRC45

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