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Gene Symbol
SALL3
Assay Reference Genome
Location

Chr.18:78980567 on build GRCh38
Cytoband
18q23
Assay ID Hs07534538_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 27164

Gene Name:

 spalt like transcription factor 3

Gene Aliases:

 ZNF796

Location:

 Chr.18:78980275-78998969 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SALL3 NM_171999.3 NP_741996.2
BC148296.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1071874 Chr.18:78978999 - 78980600 on Build GRCh38 Deletion SALL3
nsv577821 Chr.18:78980085 - 78994367 on Build GRCh38 Loss SALL3
nsv1133432 Chr.18:78976800 - 78980600 on Build GRCh38 Deletion SALL3
nsv1143887 Chr.18:78978700 - 78980600 on Build GRCh38 Deletion SALL3
nsv577793 Chr.18:78951024 - 79022312 on Build GRCh38 Loss SALL3
esv2666555 Chr.18:78977945 - 78981392 on Build GRCh38 Deletion SALL3
nsv577795 Chr.18:78972221 - 79050030 on Build GRCh38 Loss SALL3
nsv577800 Chr.18:78978993 - 78981423 on Build GRCh38 Loss SALL3
dgv564n67 Chr.18:78952775 - 79013936 on Build GRCh38 Gain SALL3
nsv828342 Chr.18:78976549 - 78983544 on Build GRCh38 Gain SALL3
dgv6103n54 Chr.18:78979851 - 78980976 on Build GRCh38 Loss SALL3
nsv828338 Chr.18:78963814 - 79001729 on Build GRCh38 Gain SALL3
dgv6104n54 Chr.18:78980034 - 78980976 on Build GRCh38 Gain+Loss SALL3
esv2717497 Chr.18:78170182 - 79635788 on Build GRCh38 Deletion LOC107985149 LOC284240 NFATC1 ATP9B SALL3 LOC100996274
nsv1141945 Chr.18:78170394 - 79635820 on Build GRCh38 Deletion LOC107985149 LOC284240 NFATC1 ATP9B SALL3 LOC100996274
dgv565n67 Chr.18:78974294 - 78993921 on Build GRCh38 Gain SALL3
dgv6101n54 Chr.18:78979457 - 78980923 on Build GRCh38 Gain SALL3
nsv828333 Chr.18:78955949 - 79017302 on Build GRCh38 Loss SALL3
nsv577794 Chr.18:78951366 - 79472709 on Build GRCh38 Gain LOC107985149 NFATC1 ATP9B SALL3 LOC100996274
esv29012 Chr.18:78979427 - 78981039 on Build GRCh38 Loss SALL3
nsv1065902 Chr.18:78538045 - 80257174 on Build GRCh38 Gain RBFA LOC105376875 KCNG2 TXNL4A NFATC1 SALL3 LOC100996274 PARD6G LOC107985149 PARD6G-AS1 RBFADN PQLC1 LOC284240 ATP9B HSBP1L1 ADNP2 LOC284241 CTDP1
esv3643277 Chr.18:78784238 - 78988253 on Build GRCh38 Loss SALL3

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More Information


Additional Information:

For this assay, SNP(s) [rs200575869] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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