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See other SLC2A4RG CNV Assays ›
Gene Symbol
SLC2A4RG
Assay Reference Genome
Location

Chr.20:63743779 on build GRCh38
Cytoband
20q13.33
Assay ID Hs00215510_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 56731

Gene Name:

 SLC2A4 regulator

Gene Aliases:

 GEF, HDBP-1, HDBP1, Si-1-2, Si-1-2-19

Location:

 Chr.20:63739858-63744050 on Build GRCh38

Assay Gene Location:

 Within Exon 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SLC2A4RG NM_020062.3 8 2008 NP_064446.2
AV659783.2 1 344
BM983611.1 1 289

Target Gene Details

Entrez Gene ID:

 140685

Gene Name:

 zinc finger and BTB domain containing 46

Gene Aliases:

 BTBD4, BZEL, RINZF, ZNF340, dJ583P15.7, dJ583P15.8

Location:

 Chr.20:63743668-63832332 on Build GRCh38

Assay Gene Location:

 Within Exon 12
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ZBTB46 NM_025224.3 5 5122 NP_079500.2
XM_005260195.4 5 5202 XP_005260252.1
XM_005260196.3 5 5018 XP_005260253.1
XM_005260197.4 5 5338 XP_005260254.1
XM_005260198.4 5 5001 XP_005260255.1
XM_006723700.3 5 5034 XP_006723763.1
XM_011528548.2 5 5302 XP_011526850.1
AK023564.1 1 2106
AK126720.1 4 4139

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2722959 Chr.20:63715664 - 63806918 on Build GRCh38 Deletion LIME1 ZGPAT ZBTB46 SLC2A4RG
nsv828803 Chr.20:63743853 - 63744438 on Build GRCh38 Gain ZBTB46 SLC2A4RG
nsv953308 Chr.20:63650148 - 63831847 on Build GRCh38 Deletion LIME1 ARFRP1 RTEL1-TNFRSF6B TNFRSF6B ZBTB46-AS1 RTEL1 STMN3 ZGPAT ZBTB46 SLC2A4RG
nsv828802 Chr.20:63743820 - 63744589 on Build GRCh38 Loss ZBTB46 SLC2A4RG
nsv1160690 Chr.20:63639552 - 63744287 on Build GRCh38 Deletion LIME1 ARFRP1 RTEL1-TNFRSF6B TNFRSF6B RTEL1 STMN3 ZGPAT ZBTB46 SLC2A4RG
esv7227 Chr.20:63715550 - 63807161 on Build GRCh38 Loss LIME1 ZGPAT ZBTB46 SLC2A4RG
nsv428381 Chr.20:63583375 - 64334167 on Build GRCh38 Gain+Loss ARFRP1 OPRL1 RTEL1-TNFRSF6B MYT1 MIR941-5 STMN3 MIR1914 ZNF512B MIR647 SLC2A4RG MIR941-4 RGS19 DNAJC5 TNFRSF6B NPBWR2 RTEL1 PCMTD2 LOC100505771 UCKL1-AS1 GMEB2 ZBTB46 TCEA2 UCKL1 LIME1 C20orf181 SOX18 LINC00266-1 LKAAEAR1 SAMD10 TPD52L2 ABHD16B MIR6813 ZBTB46-AS1 MIR941-1 ZGPAT MIR941-2 PRPF6 MIR941-3 LINC00176
nsv1059142 Chr.20:63731978 - 63798885 on Build GRCh38 Gain LIME1 ZGPAT ZBTB46 SLC2A4RG
nsv470563 Chr.20:63486715 - 63793308 on Build GRCh38 Loss FNDC11 LIME1 ARFRP1 PTK6 RTEL1-TNFRSF6B PPDPF STMN3 SRMS HELZ2 SLC2A4RG TNFRSF6B RTEL1 ZGPAT LOC100505771 GMEB2 EEF1A2 ZBTB46
dgv523n27 Chr.20:63738644 - 63789659 on Build GRCh38 Loss LIME1 ZBTB46 SLC2A4RG
esv2758806 Chr.20:63470996 - 63745014 on Build GRCh38 Gain+Loss FNDC11 LIME1 ARFRP1 PTK6 RTEL1-TNFRSF6B PPDPF STMN3 KCNQ2 SRMS HELZ2 SLC2A4RG TNFRSF6B RTEL1 ZGPAT LOC100505771 GMEB2 EEF1A2 ZBTB46

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