Hs00229649_cn

• Gene Symbol: SLC38A10
• Assay Reference Genome Location: Chr.17:81245183 on build GRCh38
• Cytoband: 17q25.3

Target Gene Details

• Entrez Gene ID: 124565
• Gene Name: solute carrier family 38 member 10
• Gene Aliases: PP1744
• Location: Chr.17:81244811-81295433 on Build GRCh38
• Assay Gene Location: Within Exon 17

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SLC38A10	NM_001037984.2	16	4151	NP_001033073.1
	XM_005257019.1	17	4269	XP_005257076.1
	XM_011524288.1	17	4290	XP_011522590.1
	XM_011524289.1	16	4266	XP_011522591.1
	XM_011524290.1	15	3545	XP_011522592.1
	AF086389.1	1	253
	AI476273.1	1	196
	BM129331.1	1	375
	CA447446.1	1	390

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv26223	Chr.17:80659041 - 81736487 on Build GRCh38	Gain+Loss	C17orf89 LOC100130370 MIR3186 ACTG1 LOC105371921 LOC107985021 BAIAP2 HGS SLC38A10 LOC105371925 TEPSIN BAHCC1 NPLOC4 MIR657 FSCN2 RPTOR MIR4740 CEP131 MRPL12 MIR338 LOC101928855 AATK MIR1250 PDE6G OXLD1 CCDC137 LOC107985022 FAAP100 SLC25A10 LOC400627 AATK-AS1 CHMP6 BAIAP2-AS1 MIR6786 TSPAN10 ARL16 LOC100129503 MIR3065 TMEM105 LINC00482
nsv2161	Chr.17:81238081 - 81282084 on Build GRCh38	Insertion	TEPSIN C17orf89 SLC38A10
nsv428351	Chr.17:81152631 - 83064073 on Build GRCh38	Gain	C17orf89 SECTM1 MIR6787 LOC100130370 SIRT7 ACTG1 TEX19 DUS1L CCDC57 HEXDC MCRIP1 NOTUM GCGR FSCN2 UTS2R MIR4740 CEP131 AATK GPS1 PDE6G OXLD1 OGFOD3 ALYREF LOC101929511 LOC105376790 STRA13 C17orf62 CSNK1D MYADML2 FN3K ARL16 ASPSCR1 TMEM105 SLC16A3 MIR4525 TBCD MAFG-AS1 P4HB CD7 MIR3186 HGS SLC38A10 LOC105371944 LOC105371925 MAFG TEPSIN BAHCC1 NPLOC4 FOXK2 ARHGDIA B3GNTL1 PCYT2 MRPL12 LOC105376791 NPB CCDC137 FAAP100 SLC25A10 ZNF750 RAB40B AATK-AS1 RAC3 PPP1R27 LRRC45 SNORD134 DCXR NARF WDR45B MIR6786 LOC101929552 TSPAN10 FASN PYCR1 FN3KRP ANAPC11 LINC00482 RFNG
esv3893051	Chr.17:81244320 - 81272804 on Build GRCh38	Gain	SLC38A10
dgv46n68	Chr.17:81133921 - 81288932 on Build GRCh38	Loss	TEPSIN AATK C17orf89 SLC38A10 CEP131 LOC105371925 AATK-AS1
nsv457971	Chr.17:81216762 - 81282974 on Build GRCh38	Loss	TEPSIN C17orf89 SLC38A10 CEP131 LOC105371925
nsv470619	Chr.17:81032233 - 81349843 on Build GRCh38	Loss	AATK C17orf89 MIR1250 BAIAP2 SLC38A10 LOC105371925 AATK-AS1 TEPSIN BAIAP2-AS1 MIR657 CEP131 MIR338 MIR3065 TMEM105 LINC00482
nsv1064123	Chr.17:81168449 - 81282457 on Build GRCh38	Gain	TEPSIN C17orf89 SLC38A10 CEP131 LOC105371925 AATK-AS1
nsv952389	Chr.17:81137501 - 81593774 on Build GRCh38	Deletion	AATK C17orf89 LOC100130370 MIR3186 ACTG1 SLC38A10 FAAP100 LOC105371925 AATK-AS1 TEPSIN BAHCC1 NPLOC4 FSCN2 MIR4740 CEP131 TMEM105 LINC00482
nsv1160499	Chr.17:81235307 - 81320655 on Build GRCh38	Deletion	TEPSIN C17orf89 SLC38A10 TMEM105 LINC00482
nsv509677	Chr.17:81227139 - 81267309 on Build GRCh38	Insertion	TEPSIN C17orf89 SLC38A10 LOC105371925

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

amino acid transporter

Gene Ontology Categories:

Process(es)

amino acid transmembrane transport
sodium ion transport
amino acid transport
bone development

Function(s)

amino acid transmembrane transporter activity