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See other PCDHB16 CNV Assays ›
Gene Symbol
PCDHB16
Assay Reference Genome
Location

Chr.5:141183715 on build GRCh38
Cytoband
5q31.3
Assay ID Hs00329060_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 57717

Gene Name:

 protocadherin beta 16

Gene Aliases:

 ME1, PCDH-BETA16, PCDH3X, PCDHB8a

Location:

 Chr.5:141181690-141186221 on Build GRCh38

Assay Gene Location:

 Within Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PCDHB16 NM_020957.3 1 2026 NP_066008.2
AB046841.1 1 2317
AF217757.1 1 1156 AAF81914.1
AK056460.1 1 1331
AY013878.1 1 1156 AAK21988.1
BC036062.1 1 1305 AAH36062.1
D88794.1 1 227 BAA21564.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv599919 Chr.5:141182193 - 141212836 on Build GRCh38 Loss PCDHB12 PCDHB16 PCDHB10 PCDHB9 PCDHB11
esv2759382 Chr.5:140777355 - 141449115 on Build GRCh38 Gain PCDHA12 PCDHB12 PCDHA1 PCDHA6 PCDHA3 PCDHB9 LOC101926905 PCDHGB4 PCDHB2 PCDHB13 PCDHGB7 PCDHB18P PCDHGB8P PCDHGB2 PCDHA4 PCDHA10 PCDHGA12 PCDHB19P PCDHB3 PCDHGA11 PCDHB4 PCDHB15 PCDHAC2 PCDHB10 PCDHGA2 PCDHA7 PCDHGB3 PCDHB16 PCDHA8 PCDHGB5 PCDHB17P PCDHGA8 PCDHGA3 PCDHB11 PCDHGA10 PCDHB1 PCDHB8 PCDHA9 PCDHGA5 PCDHA11 SLC25A2 PCDHGB1 PCDHA5 PCDHB14 PCDHGB6 PCDHA2 PCDHGA7 PCDHAC1 PCDHA13 PCDHGA6 PCDHGA9 PCDHB5 PCDHGA1 TAF7 PCDHB6 PCDHB7 PCDHGA4
nsv5031 Chr.5:141177713 - 141202707 on Build GRCh38 Insertion PCDHB16 PCDHB10 PCDHB9 PCDHB11 PCDHB8
nsv499084 Chr.5:141175152 - 141193769 on Build GRCh38 Gain PCDHB16 PCDHB10 PCDHB9 PCDHB7 PCDHB8
nsv823266 Chr.5:141156966 - 141222863 on Build GRCh38 Gain PCDHB12 PCDHB16 PCDHB13 PCDHB17P PCDHB10 PCDHB9 PCDHB14 PCDHB11 PCDHB7 PCDHB8
nsv1024594 Chr.5:141167591 - 141243953 on Build GRCh38 Loss PCDHB12 PCDHB16 PCDHB13 PCDHB10 PCDHB9 PCDHB14 PCDHB18P PCDHB11 PCDHB7 PCDHB8 PCDHB19P
nsv509092 Chr.5:141155922 - 141192231 on Build GRCh38 Insertion PCDHB16 PCDHB17P PCDHB9 PCDHB7 PCDHB8
nsv471634 Chr.5:141106394 - 141258375 on Build GRCh38 Gain+Loss PCDHB12 PCDHB16 PCDHB17P PCDHB9 PCDHB14 PCDHB11 PCDHB4 PCDHB8 PCDHB15 PCDHB13 PCDHB10 PCDHB18P PCDHB5 PCDHB6 PCDHB7 PCDHB19P
nsv428127 Chr.5:141016768 - 141319173 on Build GRCh38 Loss SLC25A2 PCDHB12 PCDHB16 PCDHB3 PCDHB17P PCDHB9 PCDHB14 PCDHB11 LOC101926905 PCDHB1 PCDHB4 PCDHB8 PCDHB15 PCDHB2 PCDHB13 PCDHB10 PCDHB18P PCDHB5 TAF7 PCDHB6 PCDHB7 PCDHB19P
esv2664767 Chr.5:141177668 - 141213756 on Build GRCh38 Deletion PCDHB12 PCDHB16 PCDHB10 PCDHB9 PCDHB11 PCDHB8
dgv958e201 Chr.5:141174165 - 141215536 on Build GRCh38 Deletion PCDHB12 PCDHB16 PCDHB13 PCDHB10 PCDHB9 PCDHB11 PCDHB7 PCDHB8
nsv599908 Chr.5:141139584 - 141250122 on Build GRCh38 Loss PCDHB12 PCDHB16 PCDHB17P PCDHB9 PCDHB14 PCDHB11 PCDHB8 PCDHB15 PCDHB13 PCDHB10 PCDHB18P PCDHB6 PCDHB7 PCDHB19P

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