Hs00396535_cn

• Gene Symbol: PRG4
• Assay Reference Genome Location: Chr.1:186304905 on build GRCh38
• Cytoband: 1q31.1

Target Gene Details

• Entrez Gene ID: 10216
• Gene Name: proteoglycan 4
• Gene Aliases: CACP, HAPO, JCAP, MSF, SZP
• Location: Chr.1:186296273-186314562 on Build GRCh38
• Assay Gene Location: Overlaps Exon 6 - Intron 6

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PRG4	NM_001127708.2			NP_001121180.2
	NM_001127709.2			NP_001121181.2
	NM_001127710.2			NP_001121182.2
	NM_001303232.1			NP_001290161.1
	NM_005807.4			NP_005798.3
	XM_017000002.1			XP_016855491.1
	XM_017000003.1			XP_016855492.1
	AK057197.1
	AK131434.1			BAD18580.1
	AK297718.1
	AK301343.1
	AK301487.1
	AK308235.1
	DA977744.1
	DA995681.1
	DC295855.1
	DC404857.1
	U70136.1			AAB09089.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv3575361	Chr.1:186266048 - 186604612 on Build GRCh38	Gain	TPR PRG4 PDC C1orf27 LOC102724919 OCLM
esv3890826	Chr.1:185730915 - 186448352 on Build GRCh38	Gain	TPR PRG4 PDC C1orf27 LOC102724919 HMCN1 OCLM

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

receptor-mediated endocytosis
immune response
cell proliferation

Function(s)

scavenger receptor activity
polysaccharide binding