Genomic Map
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Target Gene Details
Entrez Gene ID: | 8243 |
Gene Name: | structural maintenance of chromosomes 1A |
Gene Aliases: |
CDLS2, DXS423E, SB1.8, SMC1, SMC1L1, SMC1alpha, SMCB |
Location: |
Chr.X:53374149-53422728 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 24 - Exon 25 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| SMC1A | NM_001281463.1 | NP_001268392.1 | ||
| NM_006306.3 | NP_006297.2 | |||
| BC112127.1 | AAI12128.1 | |||
| D80000.2 | BAA11495.2 | |||
| S78271.1 | AAB34405.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| esv2740175 | Chr.X:52862926 - 55652533 on Build GRCh38 | Deletion |
 MIR4536-1
SNORA11
WNK3
APEX2
MTRNR2L10
USP51
RIBC1
MAGED2
XAGE3
MIR6895
KDM5C
MIRLET7F2
GNL3L
TRO
PAGE2
GPR173
PAGE3
PFKFB1
MIR6894
TSPYL2
MIR4536-2
ALAS2
FOXR2
SNORA109
KANTR
FAM156B
PAGE2B
HUWE1
MAGEH1
MIR98
TSR2
MIR6857
PHF8
SMC1A
HSD17B10
LOC100421746
FAM104B
FAM120C
IQSEC2
PAGE5
FGD1
ITIH6
FAM156A
|
| nsv435891 | Chr.X:52861979 - 55653313 on Build GRCh38 | Deletion |
MIR4536-1
SNORA11
WNK3
APEX2
MTRNR2L10
USP51
RIBC1
MAGED2
XAGE3
MIR6895
KDM5C
MIRLET7F2
GNL3L
TRO
PAGE2
GPR173
PAGE3
PFKFB1
MIR6894
TSPYL2
MIR4536-2
ALAS2
FOXR2
SNORA109
KANTR
FAM156B
PAGE2B
HUWE1
MAGEH1
MIR98
TSR2
MIR6857
PHF8
SMC1A
HSD17B10
LOC100421746
FAM104B
FAM120C
IQSEC2
PAGE5
FGD1
ITIH6
FAM156A
|
Back To TopMore Information
Set Membership: |
Intragenic
Non-exonic
DGV Variation
|
Gene Ontology Categories:
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