Hs01002997_cn

• Gene Symbol: GHRLOS
• Assay Reference Genome Location: Chr.3:10281227 on build GRCh38
• Cytoband: 3p25.3

Target Gene Details

• Entrez Gene ID: 100126793
• Gene Name: ghrelin opposite strand/antisense RNA
• Gene Aliases: GHRL-AS1, GHRLAS, NCRNA00068
• Location: Chr.3:10280952-10293449 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
GHRLOS	NR_004431.3
	NR_024144.2
	NR_024145.2
	NR_073566.1
	NR_073567.1
	NR_073568.1
	EU789528.1
	EU789529.1
	EU789530.1
	EU789534.1
	EU789535.1
	EU789536.1
	EU789537.1
	EU789538.1
	EU789539.1
	EU789540.1
	EU789541.1
	EU789542.1
	EU789543.1
	EU789544.1
	EU789545.1
	EU789546.1
	EU789547.1
	EU789548.1
	EU789549.1
	EU789550.1
	EU789551.1
	EU789552.1

Target Gene Details

• Entrez Gene ID: 9797
• Gene Name: TatD DNase domain containing 2
• Gene Aliases: -
• Location: Chr.3:10248493-10281222 on Build GRCh38
• Assay Gene Location: Overlaps - Exon 8

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TATDN2	NM_014760.3			NP_055575.3
	AW274827.1
	BC090935.1			AAH90935.1
	D86972.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv436362	Chr.3:10048344 - 11860564 on Build GRCh38	Deletion	FANCD2OS GHRL VHL SLC6A1 LINC00606 LINC00852 ATP2B2 ATP2B2-IT2 SEC13 GHRLOS VGLL4 FANCD2 SLC6A1-AS1 TAMM41 MIR885 LOC101927467 MIR378B TATDN2 IRAK2 SLC6A11 BRK1 HRH1 ATG7
nsv508903	Chr.3:10275353 - 10401894 on Build GRCh38	Insertion	GHRL SEC13 GHRLOS MIR885 MIR378B TATDN2 LINC00852 ATP2B2
nsv589650	Chr.3:10260488 - 10294102 on Build GRCh38	Loss	GHRL GHRLOS TATDN2 LINC00852
dgv762e201	Chr.3:10008967 - 11913136 on Build GRCh38	Deletion	SLC6A1 LINC00606 FANCD2P2 CIDECP ATP2B2 ATP2B2-IT2 EMC3 SEC13 GHRLOS FANCD2 TAMM41 IRAK2 BRK1 HRH1 ATG7 FANCD2OS GHRL VHL LINC00852 VGLL4 SLC6A1-AS1 LOC401052 MIR885 LOC101927467 MIR378B TATDN2 SLC6A11
nsv1121603	Chr.3:10071433 - 11889279 on Build GRCh38	Deletion	FANCD2OS GHRL VHL SLC6A1 LINC00606 FANCD2P2 LINC00852 ATP2B2 ATP2B2-IT2 SEC13 GHRLOS VGLL4 FANCD2 SLC6A1-AS1 TAMM41 MIR885 LOC101927467 MIR378B TATDN2 IRAK2 SLC6A11 BRK1 HRH1 ATG7
nsv436869	Chr.3:10064456 - 11877985 on Build GRCh38	Insertion	FANCD2OS GHRL VHL SLC6A1 LINC00606 FANCD2P2 LINC00852 ATP2B2 ATP2B2-IT2 SEC13 GHRLOS VGLL4 FANCD2 SLC6A1-AS1 TAMM41 MIR885 LOC101927467 MIR378B TATDN2 IRAK2 SLC6A11 BRK1 HRH1 ATG7
nsv1073204	Chr.3:9996548 - 11875005 on Build GRCh38	Deletion	SLC6A1 LINC00606 FANCD2P2 EMC3-AS1 CIDECP ATP2B2 ATP2B2-IT2 EMC3 SEC13 GHRLOS FANCD2 TAMM41 IRAK2 BRK1 HRH1 ATG7 FANCD2OS GHRL VHL LINC00852 VGLL4 SLC6A1-AS1 LOC401052 MIR885 LOC101927467 MIR378B TATDN2 SLC6A11

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

DNA catabolic process
IRE1-mediated unfolded protein response
nucleic acid phosphodiester bond hydrolysis

Function(s)

deoxyribonuclease activity
endodeoxyribonuclease activity, producing 5'-phosphomonoesters
metal ion binding