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Gene Symbol
DDX28
Assay Reference Genome
Location

Chr.16:68021889 on build GRCh38
Cytoband
16q22.1
Assay ID Hs01201245_cn
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Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 55794

Gene Name:

 DEAD-box helicase 28

Gene Aliases:

 MDDX28

Location:

 Chr.16:68021274-68023867 on Build GRCh38

Assay Gene Location:

 Within Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
DDX28 NM_018380.3 1 1979 NP_060850.2
AK002144.1 1 1554 BAA92106.1
BC024273.1 1 1321 AAH24273.1
BM671594.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2666619 Chr.16:68003989 - 68045407 on Build GRCh38 Deletion DDX28 DUS2 LOC100131303
nsv522852 Chr.16:67153308 - 68071571 on Build GRCh38 Gain FBXL8 ELMO3 NOL3 AGRP DPEP3 CTCF DPEP2 SLC9A5 FAM65A CENPT LOC100131303 PLEKHG4 FHOD1 NUTF2 LRRC36 CTRL LCAT ACD C16orf86 PARD6A E2F4 LOC100505942 ATP6V0D1 LOC107984813 DUS2 TSNAXIP1 TRADD TPPP3 KCTD19 PSKH1 EDC4 CARMIL2 HSF4 HSD11B2 EXOC3L1 DDX28 MIR328 THAP11 ZDHHC1 NRN1L GFOD2 KIAA0895L TMEM208 SLC12A4 RANBP10 ENKD1 LOC105369155 PSMB10 LRRC29
esv3638897 Chr.16:68004075 - 68045657 on Build GRCh38 Loss DDX28 DUS2 LOC100131303
esv3638899 Chr.16:68008886 - 68035332 on Build GRCh38 Loss DDX28 DUS2 LOC100131303
nsv524363 Chr.16:67136529 - 68071571 on Build GRCh38 Loss FBXL8 ELMO3 NOL3 AGRP DPEP3 CTCF DPEP2 SLC9A5 FAM65A CENPT LOC100131303 PLEKHG4 C16orf70 FHOD1 NUTF2 LRRC36 CTRL LCAT ACD C16orf86 PARD6A E2F4 LOC100505942 B3GNT9 ATP6V0D1 LOC107984813 DUS2 TSNAXIP1 TRADD TPPP3 KCTD19 PSKH1 EDC4 CARMIL2 HSF4 HSD11B2 EXOC3L1 DDX28 MIR328 THAP11 ZDHHC1 NRN1L GFOD2 KIAA0895L TMEM208 SLC12A4 RANBP10 ENKD1 LOC105369155 PSMB10 LRRC29

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More Information


Additional Information:

For this assay, SNP(s) [rs77242604] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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