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See other SPATC1 CNV Assays ›
Gene Symbol
SPATC1
Assay Reference Genome
Location

Chr.8:144040055 on build GRCh38
Cytoband
8q24.3
Assay ID Hs01433309_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 375686

Gene Name:

 spermatogenesis and centriole associated 1

Gene Aliases:

 SPATA15

Location:

 Chr.8:144010992-144047114 on Build GRCh38

Assay Gene Location:

 Within Exon 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SPATC1 NM_001134374.1 2 460 NP_001127846.1
NM_198572.2 2 460 NP_940974.2
XM_011517021.1 2 460 XP_011515323.1
XM_011517022.2 2 746 XP_011515324.1
XM_011517023.2 2 1764 XP_011515325.1
XM_011517024.2 3 985 XP_011515326.1
XM_011517025.2 2 1420 XP_011515327.1
XM_017013399.1 3 279 XP_016868888.1
AB092352.1 2 448 BAD08232.1
AK301710.1 2 448
BC050390.1 2 450 AAH50390.1
BC053547.1 2 435 AAH53547.1
DB052198.1 2 461

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv612915 Chr.8:144007080 - 144224185 on Build GRCh38 Loss HGH1 GPAA1 SHARPIN EXOSC4 WDR97 MROH1 OPLAH CYC1 MIR6846 MAF1 SMPD5 SPATC1 MIR6847
nsv470249 Chr.8:143889098 - 144519234 on Build GRCh38 Loss LOC101928953 SCRT1 MIR7112 CPSF1 PLEC PPP1R16A FBXL6 ADCK5 VPS28 WDR97 MROH1 LRRC14 MIR6893 TONSL-AS1 MIR661 BOP1 CYC1 GRINA SLC39A4 DGAT1 MIR6848 RECQL4 TONSL HGH1 HSF1 MIR939 GPAA1 MFSD3 SHARPIN LOC101928902 FOXH1 SLC52A2 PARP10 EXOSC4 KIFC2 SCX TMEM249 OPLAH CYHR1 MIR6846 MAF1 GPT MIR1234 SMPD5 SPATC1 MIR6847 MIR6849
nsv6446 Chr.8:144012529 - 144050050 on Build GRCh38 Insertion SMPD5 SPATC1
nsv515809 Chr.8:143904439 - 144519234 on Build GRCh38 Gain+Loss LOC101928953 SCRT1 MIR7112 CPSF1 PLEC PPP1R16A FBXL6 ADCK5 VPS28 WDR97 MROH1 LRRC14 MIR6893 TONSL-AS1 MIR661 BOP1 CYC1 GRINA SLC39A4 DGAT1 MIR6848 RECQL4 TONSL HGH1 HSF1 MIR939 GPAA1 MFSD3 SHARPIN LOC101928902 FOXH1 SLC52A2 PARP10 EXOSC4 KIFC2 SCX TMEM249 OPLAH CYHR1 MIR6846 MAF1 GPT MIR1234 SMPD5 SPATC1 MIR6847 MIR6849
nsv612914 Chr.8:143972494 - 144120626 on Build GRCh38 Loss GPAA1 SHARPIN PLEC PARP10 EXOSC4 WDR97 OPLAH CYC1 GRINA MIR6846 MAF1 SMPD5 SPATC1 MIR6847
dgv12431n54 Chr.8:143845100 - 144161320 on Build GRCh38 Loss HGH1 GPAA1 SHARPIN PLEC PARP10 EXOSC4 WDR97 MROH1 MIR661 OPLAH CYC1 GRINA MIR6846 MAF1 EPPK1 SMPD5 SPATC1 MIR6847
nsv950015 Chr.8:143866633 - 144125597 on Build GRCh38 Deletion GPAA1 SHARPIN PLEC PARP10 EXOSC4 WDR97 MIR661 OPLAH CYC1 GRINA MIR6846 MAF1 EPPK1 SMPD5 SPATC1 MIR6847
nsv1161815 Chr.8:143775169 - 144080674 on Build GRCh38 Deletion PLEC PUF60 PARP10 EXOSC4 SCRIB MIR6845 MIR661 OPLAH GRINA MIR937 LOC642574 MIR6846 NRBP2 EPPK1 SMPD5 SPATC1 MIR6847
nsv470250 Chr.8:143917934 - 144097007 on Build GRCh38 Gain GPAA1 MIR661 OPLAH CYC1 GRINA MIR6846 PLEC PARP10 SMPD5 SPATC1 MIR6847 EXOSC4
dgv12433n54 Chr.8:143902404 - 144120626 on Build GRCh38 Gain GPAA1 SHARPIN PLEC PARP10 EXOSC4 WDR97 MIR661 OPLAH CYC1 GRINA MIR6846 MAF1 SMPD5 SPATC1 MIR6847
nsv612906 Chr.8:143917935 - 144090784 on Build GRCh38 Loss GPAA1 MIR661 OPLAH GRINA MIR6846 PLEC PARP10 SMPD5 SPATC1 MIR6847 EXOSC4

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

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