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See other TJP1 CNV Assays ›
Gene Symbol
TJP1
Assay Reference Genome
Location

Chr.15:29700986 on build GRCh38
Cytoband
15q13.1
Assay ID Hs01486294_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 7082

Gene Name:

 tight junction protein 1

Gene Aliases:

 ZO-1

Location:

 Chr.15:29699367-29968919 on Build GRCh38

Assay Gene Location:

 Within Exon 33
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TJP1 NM_001301025.1 29 6155 NP_001287954.1
NM_001301026.1 28 5930 NP_001287955.1
NM_003257.4 28 6331 NP_003248.3
NM_175610.3 27 6091 NP_783297.2
XM_005254617.3 29 6215 XP_005254674.2
XM_005254618.3 28 6022 XP_005254675.1
XM_005254619.3 28 6035 XP_005254676.2
XM_005254620.3 28 5975 XP_005254677.2
XM_011521972.2 29 6236 XP_011520274.2
XM_017022521.1 30 6326 XP_016878010.1
XM_017022522.1 30 6287 XP_016878011.1
XM_017022523.1 30 6266 XP_016878012.1
XM_017022524.1 29 6086 XP_016878013.1
XM_017022525.1 29 6088 XP_016878014.1
XM_017022526.1 29 6073 XP_016878015.1
XM_017022527.1 29 6114 XP_016878016.1
XM_017022528.1 28 5998 XP_016878017.1
XM_017022529.1 28 5983 XP_016878018.1
XM_017022530.1 27 5782 XP_016878019.1
XM_017022531.1 30 6156 XP_016878020.1
AB370197.1 27 5895
AF035298.1
BX640879.1 28 5931 CAE45936.1
CR749235.1 20 4684 CAH18091.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1040778 Chr.15:28689598 - 30515727 on Build GRCh38 Loss LOC100130111 GOLGA8R PDCD6IPP2 GOLGA6L7P DKFZP434L187 APBA2 LOC105370751 GOLGA8T LOC100289656 LOC107984752 LOC101060569 TJP1 ULK4P3 CHRFAM7A GOLGA8J GOLGA8M FAM189A1 NSMCE3 LOC105370746 WHAMMP2
nsv832945 Chr.15:29640395 - 29831518 on Build GRCh38 Gain LOC100130111 TJP1
nsv527255 Chr.15:28754022 - 30074044 on Build GRCh38 Gain LOC100289656 LOC100130111 LOC107984752 TJP1 PDCD6IPP2 GOLGA6L7P APBA2 FAM189A1 NSMCE3 WHAMMP2
esv2751526 Chr.15:28724519 - 30687025 on Build GRCh38 Loss ARHGAP11B GOLGA8R LOC101927579 LOC100289656 LOC101060569 TJP1 LOC100288637 CHRFAM7A GOLGA8J LOC100996413 FAM189A1 NSMCE3 LOC105370746 GOLGA8H LOC100130111 PDCD6IPP2 GOLGA6L7P DKFZP434L187 APBA2 LOC105370751 GOLGA8T LOC107984752 ULK4P2 ULK4P3 WHAMMP2
nsv1039798 Chr.15:28724126 - 30158154 on Build GRCh38 Gain LOC100130111 PDCD6IPP2 GOLGA6L7P APBA2 GOLGA8T LOC100289656 LOC107984752 TJP1 ULK4P3 GOLGA8J FAM189A1 NSMCE3 WHAMMP2
nsv568675 Chr.15:29035149 - 29916451 on Build GRCh38 Gain LOC100130111 TJP1 APBA2 FAM189A1 NSMCE3
nsv832944 Chr.15:29568858 - 29789854 on Build GRCh38 Gain+Loss LOC100130111 TJP1 FAM189A1

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