Hs01807443_cn

• Gene Symbol: PPM1M
• Assay Reference Genome Location: Chr.3:52246186 on build GRCh38
• Cytoband: 3p21.2

Target Gene Details

• Entrez Gene ID: 132160
• Gene Name: protein phosphatase, Mg2+/Mn2+ dependent 1M
• Gene Aliases: PP2C-eta, PP2CE, PP2Ceta
• Location: Chr.3:52245725-52250599 on Build GRCh38
• Assay Gene Location: Overlaps Intron 1 - Exon 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PPM1M	NM_001122870.2			NP_001116342.1
	NM_144641.3			NP_653242.3
	XM_005264879.2			XP_005264936.1
	XM_005264880.3			XP_005264937.1
	XM_005264881.1			XP_005264938.1
	AB474372.1
	AK056894.1			BAB71302.1
	AK096681.1			BAC04839.1
	BC009644.1			AAH09644.1
	DA869388.1
	DB479638.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv834695	Chr.3:52165685 - 52366561 on Build GRCh38	Loss	GLYCTK PPM1M WDR82 GLYCTK-AS1 MIR135A1 TWF2 ALAS1 TLR9 DNAH1 LOC101929054 MIRLET7G
nsv508926	Chr.3:52121853 - 52256394 on Build GRCh38	Insertion	PPM1M WDR82 POC1A TWF2 ALAS1 TLR9 LOC101929054
nsv834694	Chr.3:52144967 - 52301805 on Build GRCh38	Gain	GLYCTK PPM1M WDR82 GLYCTK-AS1 POC1A MIR135A1 TWF2 ALAS1 TLR9 LOC101929054 MIRLET7G
nsv460537	Chr.3:52114217 - 52256534 on Build GRCh38	Loss	PPM1M WDR82 POC1A TWF2 ALAS1 TLR9 LOC101929054
nsv519445	Chr.3:51970301 - 52333916 on Build GRCh38	Gain+Loss	GLYCTK PPM1M POC1A MIR135A1 TWF2 ALAS1 TLR9 LOC101929054 ABHD14A-ACY1 LINC00696 ABHD14A WDR82 GLYCTK-AS1 ABHD14B RPL29 ACY1 DNAH1 DUSP7 MIRLET7G
nsv470572	Chr.3:52089297 - 52316196 on Build GRCh38	Loss	GLYCTK PPM1M WDR82 GLYCTK-AS1 POC1A MIR135A1 TWF2 ALAS1 TLR9 DNAH1 LOC101929054 MIRLET7G

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

protein phosphatase

Gene Ontology Categories:

Process(es)

protein dephosphorylation

Function(s)

CTD phosphatase activity
manganese ion binding