Hs01847340_cn

• Gene Symbol: LOC101929512
• Assay Reference Genome Location: Chr.2:161235395 on build GRCh38
• Cytoband: 2q24.2

Target Gene Details

• Entrez Gene ID: 101929512
• Gene Name: uncharacterized LOC101929512
• Gene Aliases: -
• Location: Chr.2:161223258-161254643 on Build GRCh38
• Assay Gene Location: Within Intron 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
LOC101929512	NR_110593.1
	BX107690.1

Target Gene Details

• Entrez Gene ID: 10010
• Gene Name: TRAF family member associated NFKB activator
• Gene Aliases: I-TRAF, ITRAF, TRAF2
• Location: Chr.2:161136955-161236176 on Build GRCh38
• Assay Gene Location: Within Exon 13

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TANK	NM_001199135.1	8	1263	NP_001186064.1
	NM_004180.2	8	1313	NP_004171.2
	XM_005246207.3	8	1301	XP_005246264.2
	XM_017003093.1	9	1494	XP_016858582.1
	XM_017003094.1	10	1836	XP_016858583.1
	XM_017003095.1	10	1741	XP_016858584.1
	XM_017003096.1	8	1295	XP_016858585.1
	XM_017003097.1	10	1569	XP_016858586.1
	AK313096.1	8	1263
	BC067779.1	8	1255	AAH67779.1
	U59863.1	8	1313	AAC50681.1
	U63830.1	8	1312	AAC50770.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv7140n54	Chr.2:161155624 - 161270523 on Build GRCh38	Loss	LOC100996579 TANK LOC101929512
nsv834437	Chr.2:161075774 - 161268203 on Build GRCh38	Gain	LOC100996579 TANK LOC101929512
nsv437557	Chr.2:161195062 - 161236129 on Build GRCh38	Loss	TANK LOC101929512
nsv583500	Chr.2:161203306 - 161389321 on Build GRCh38	Loss	LOC100996579 PSMD14 TANK LOC101929512

More Information

• Set Membership: Intragenic, Exonic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

proteolysis
cellular response to DNA damage stimulus
signal transduction
I-kappaB kinase/NF-kappaB signaling
TRIF-dependent toll-like receptor signaling pathway
negative regulation of I-kappaB kinase/NF-kappaB signaling
cellular response to interleukin-1
cellular response to tumor necrosis factor
cellular response to ionizing radiation
positive regulation of protein deubiquitination
positive regulation of ubiquitin-specific protease activity

Function(s)

thiol-dependent ubiquitin-specific protease activity
protein binding
ubiquitin protein ligase binding
deubiquitinase activator activity
metal ion binding