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See other ATP2C2 CNV Assays ›
Gene Symbol
ATP2C2
Assay Reference Genome
Location

Chr.16:84410583 on build GRCh38
Cytoband
16q24.1
Assay ID Hs01854319_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 9914

Gene Name:

 ATPase secretory pathway Ca2+ transporting 2

Gene Aliases:

 SPCA2

Location:

 Chr.16:84368523-84465777 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 6 - Intron 7
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ATP2C2 NM_001286527.2 NP_001273456.2
NM_001291454.1 NP_001278383.1
NM_014861.3 NP_055676.3
XM_011523486.2 XP_011521788.1
AB014603.1 BAA31678.2
AK091051.1
AK300526.1
AK316128.1
AY791884.1 AAV54193.1
BX648333.1 CAI46049.1
CR749829.1 CAH18686.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1061004 Chr.16:84405376 - 84561748 on Build GRCh38 Loss ATP2C2 TLDC1 LOC105371374
nsv1064677 Chr.16:84384525 - 84462657 on Build GRCh38 Loss ATP2C2 LOC105371374
nsv1060813 Chr.16:84406267 - 84430850 on Build GRCh38 Loss ATP2C2
dgv169n21 Chr.16:84346305 - 84480735 on Build GRCh38 Loss ATP2C2 TLDC1 LOC105371374
esv3892928 Chr.16:84339110 - 84524557 on Build GRCh38 Loss ATP2C2 TLDC1 LOC105371374
nsv573425 Chr.16:84298994 - 84575953 on Build GRCh38 Loss COTL1 ATP2C2 TLDC1 LOC105371374 WFDC1
nsv471107 Chr.16:84378250 - 84455427 on Build GRCh38 Gain ATP2C2
nsv457598 Chr.16:84367244 - 84435705 on Build GRCh38 Loss ATP2C2
nsv457599 Chr.16:84378422 - 84455324 on Build GRCh38 Gain ATP2C2
nsv1066356 Chr.16:84401623 - 84438300 on Build GRCh38 Loss ATP2C2
nsv483044 Chr.16:84166395 - 87066394 on Build GRCh38 Gain LOC101928557 LOC440390 COX4I1 COTL1 LOC102724344 ATP2C2 FENDRR LOC101928474 LOC146513 KIAA0513 FOXF1 WFDC1 MTHFSD ADAD2 KLHL36 FOXL1 LOC101928614 C16orf74 FOXC2-AS1 CRISPLD2 MIR1910 TLDC1 LINC00311 GSE1 MIR6774 USP10 LOC105376777 IRF8 LINC00917 FAM92B FOXC2 LOC105371374 TAF1C MIR5093 EMC8 FLJ30679 ZDHHC7 LOC400548 GINS2 LINC01081 LINC01082 DNAAF1 KCNG4
dgv5263n54 Chr.16:84403617 - 84435705 on Build GRCh38 Loss ATP2C2
nsv523226 Chr.16:84397270 - 84455427 on Build GRCh38 Loss ATP2C2
nsv1059640 Chr.16:84338790 - 84543759 on Build GRCh38 Loss ATP2C2 TLDC1 LOC105371374
dgv548e214 Chr.16:84253360 - 84417275 on Build GRCh38 Gain LOC105376777 ATP2C2 WFDC1
dgv5262n54 Chr.16:84381903 - 84583279 on Build GRCh38 Loss COTL1 ATP2C2 TLDC1 LOC105371374
nsv573430 Chr.16:84387654 - 84501190 on Build GRCh38 Loss ATP2C2 TLDC1 LOC105371374
nsv1056072 Chr.16:84397757 - 84451417 on Build GRCh38 Loss ATP2C2

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