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See other XKR5 CNV Assays ›
Gene Symbol
XKR5
Assay Reference Genome
Location

Chr.8:6811378 on build GRCh38
Cytoband
8p23.1
Assay ID Hs02007798_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 389610

Gene Name:

 XK related 5

Gene Aliases:

 HARL2754, UNQ2754, XRG5A, XRG5BM

Location:

 Chr.8:6808517-6835644 on Build GRCh38

Assay Gene Location:

 Within Exon 9
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
XKR5 NM_001289973.1 8 2170 NP_001276902.1
NM_207411.4 7 2032 NP_997294.3
XM_011534750.2 3 2538 XP_011533052.1
XM_017013401.1 6 2451 XP_016868890.1
XM_017013402.1 5 2243 XP_016868891.1
AY358489.1 7 1903 AAQ88853.1
AY534242.1 7 2032 AAT07091.1
AY534243.1 8 2024 AAT07092.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1021684 Chr.8:6492570 - 6951933 on Build GRCh38 Loss XKR5 DEFA6 GS1-24F4.2 MCPH1-AS1 MIR8055 DEFA8P MCPH1 ANGPT2 MIR4659A MIR4659B DEFB1 DEFA4 AGPAT5
nsv610004 Chr.8:6544845 - 6915391 on Build GRCh38 Gain MIR8055 XKR5 MCPH1 GS1-24F4.2 ANGPT2 MCPH1-AS1 MIR4659A MIR4659B DEFB1 AGPAT5
nsv1025976 Chr.8:6615427 - 6829450 on Build GRCh38 Loss MIR8055 XKR5 MCPH1 MCPH1-AS1 MIR4659A MIR4659B AGPAT5
esv3576520 Chr.8:6794391 - 7186524 on Build GRCh38 Gain DEFA9P XKR5 DEFA6 GS1-24F4.2 DEFA11P DEFA7P DEFA5 DEFA1B DEFA1 DEFA10P DEFA8P DEFT1P DEFA3 DEFT1P2 DEFB1 DEFA4
esv2422383 Chr.8:6504868 - 6924071 on Build GRCh38 Duplication MIR8055 XKR5 MCPH1 GS1-24F4.2 ANGPT2 MCPH1-AS1 MIR4659A MIR4659B DEFB1 AGPAT5
nsv831220 Chr.8:6670324 - 6870969 on Build GRCh38 Gain XKR5 GS1-24F4.2 MCPH1-AS1 MIR4659A MIR4659B DEFB1 AGPAT5
nsv610006 Chr.8:6710680 - 7063882 on Build GRCh38 Gain DEFA9P XKR5 DEFA6 GS1-24F4.2 DEFA11P DEFA7P DEFA5 DEFA1B DEFA1 DEFA10P DEFA8P DEFT1P DEFA3 MIR4659A DEFT1P2 MIR4659B DEFB1 DEFA4 AGPAT5
nsv1031577 Chr.8:6712833 - 8008628 on Build GRCh38 Gain DEFA6 DEFB107A DEFA11P USP17L3 PRR23D2 DEFA7P DEFB103A DEFA1B DEFA10P DEFA8P DEFB105A SPAG11A XKR5 GS1-24F4.2 LOC107986910 ZNF705G DEFB109P1B DEFB105B USP17L1 DEFA9P OR7E125P DEFB108P1 OR7E154P SPAG11B USP17L4 LOC101929400 DEFB104B DEFB4A ZNF705B FAM90A10P DEFB104A DEFB103B DEFB4B FAM90A7P MIR4659A DEFT1P2 DEFB106B DEFB1 DEFA4 AGPAT5 LINC00965 DEFB107B FAM66B LOC101928095 DEFA5 USP17L8 DEFA1 DEFB106A PRR23D1 DEFT1P DEFA3 MIR4659B FAM66E
nsv465437 Chr.8:6797870 - 6971563 on Build GRCh38 Gain DEFA9P XKR5 DEFA6 DEFA10P DEFA8P GS1-24F4.2 DEFB1 DEFA4
esv2752262 Chr.8:6781378 - 7153553 on Build GRCh38 Gain DEFA9P XKR5 DEFA6 GS1-24F4.2 DEFA11P DEFA7P DEFA5 DEFA1B DEFA1 DEFA10P DEFA8P DEFT1P DEFA3 DEFT1P2 DEFB1 DEFA4
dgv6876n100 Chr.8:6687977 - 6812428 on Build GRCh38 Loss XKR5 MCPH1-AS1 MIR4659A MIR4659B AGPAT5

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

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