Hs02202516_cn

• Gene Symbol: SSNA1
• Assay Reference Genome Location: Chr.9:137189226 on build GRCh38
• Cytoband: 9q34.3

Target Gene Details

• Entrez Gene ID: 8636
• Gene Name: SS nuclear autoantigen 1
• Gene Aliases: N14, NA-14, NA14
• Location: Chr.9:137188602-137190370 on Build GRCh38
• Assay Gene Location: Overlaps Exon 2 - Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SSNA1	NM_003731.2			NP_003722.2
	BC000864.1			AAH00864.1
	BT006766.1			AAP35412.1
	CR542238.1			CAG47034.1
	DB466912.1
	Z96932.1			CAB09660.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv616007	Chr.9:137079368 - 137240666 on Build GRCh38	Loss	UAP1L1 TPRN RNF224 TMEM203 TMEM210 MAN1B1 MAN1B1-AS1 NDOR1 LRRC26 ANAPC2 LOC101930307 CYSRT1 DPP7 MIR3621 GRIN1 SSNA1 RNF208 SLC34A3
dgv13009n54	Chr.9:137173890 - 137327859 on Build GRCh38	Loss	FAM166A TPRN C9orf173-AS1 RNF224 TMEM203 NELFB NDOR1 NRARP ANAPC2 CYSRT1 STPG3 TOR4A EXD3 SSNA1 RNF208 SLC34A3 TUBB4B
nsv524322	Chr.9:136795692 - 137482216 on Build GRCh38	Loss	TMEM203 FBXW5 LCNL1 LRRC26 LOC101930307 C9orf142 STPG3 EXD3 GRIN1 C9orf139 RNF208 CCDC183 NELFB MAN1B1 MAN1B1-AS1 NDOR1 MIR7114 PHPT1 MAMDC4 TOR4A ENTPD8 SSNA1 NOXA1 C9orf172 RABL6 UAP1L1 TPRN RNF224 TMEM210 C8G ANAPC2 MIR4292 NPDC1 FUT7 MIR4479 NSMF DPP7 PNPLA7 CLIC3 ABCA2 FAM166A LCN12 TRAF2 C9orf173-AS1 PRR31 EDF1 NRARP CYSRT1 ENTPD2 MIR3621 CCDC183-AS1 SAPCD2 PTGDS SLC34A3 TUBB4B
nsv951207	Chr.9:137136949 - 137379148 on Build GRCh38	Deletion	FAM166A TPRN C9orf173-AS1 RNF224 TMEM203 NELFB TMEM210 NDOR1 NRARP LRRC26 ANAPC2 CYSRT1 MIR3621 STPG3 TOR4A EXD3 GRIN1 SSNA1 RNF208 SLC34A3 TUBB4B
nsv1161918	Chr.9:137118319 - 137438026 on Build GRCh38	Duplication	FAM166A TPRN C9orf173-AS1 RNF224 TMEM203 NELFB TMEM210 NDOR1 NRARP LRRC26 ANAPC2 CYSRT1 MIR3621 STPG3 TOR4A EXD3 GRIN1 ENTPD8 SSNA1 RNF208 SLC34A3 NOXA1 TUBB4B
esv2761561	Chr.9:137030185 - 137191593 on Build GRCh38	Gain	UAP1L1 TMEM210 MAN1B1 MAN1B1-AS1 LRRC26 ANAPC2 NPDC1 FUT7 LOC101930307 DPP7 ENTPD2 MIR3621 GRIN1 C9orf139 SAPCD2 SSNA1
esv2422220	Chr.9:136584135 - 137350098 on Build GRCh38	Deletion	LCN6 TMEM203 FBXW5 TMEM141 LCNL1 LRRC26 LCN10 LOC101930307 C9orf142 MIR126 SNORA17A EGFL7 STPG3 EXD3 GRIN1 C9orf139 LCN8 RNF208 SNHG7 FAM69B CCDC183 NELFB MAN1B1 MAN1B1-AS1 NDOR1 LINC01451 PHPT1 MAMDC4 TOR4A SSNA1 C9orf172 RABL6 UAP1L1 TPRN RNF224 TMEM210 C8G ANAPC2 MIR4292 NPDC1 FUT7 MIR4479 DPP7 CLIC3 ABCA2 FAM166A LCN12 TRAF2 C9orf173-AS1 SNORA17B PRR31 EDF1 LOC100128593 NRARP CYSRT1 MIR6722 ENTPD2 MIR3621 CCDC183-AS1 SAPCD2 AGPAT2 PTGDS LCN15 HSPC324 SLC34A3 TUBB4B

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

G2/M transition of mitotic cell cycle
intraciliary transport
ciliary receptor clustering involved in smoothened signaling pathway

Function(s)

protein binding
identical protein binding