Hs02529475_cn

• Gene Symbol: SLC38A10
• Assay Reference Genome Location: Chr.17:81247054 on build GRCh38
• Cytoband: 17q25.3

Target Gene Details

• Entrez Gene ID: 124565
• Gene Name: solute carrier family 38 member 10
• Gene Aliases: PP1744
• Location: Chr.17:81244811-81295433 on Build GRCh38
• Assay Gene Location: Overlaps Intron 15 - Exon 16

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SLC38A10	NM_001037984.2			NP_001033073.1
	XM_005257019.1			XP_005257076.1
	XM_011524288.1			XP_011522590.1
	XM_011524289.1			XP_011522591.1
	XM_011524290.1			XP_011522592.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv2161	Chr.17:81238081 - 81282084 on Build GRCh38	Insertion	TEPSIN SLC38A10 C17orf89
esv26223	Chr.17:80659041 - 81736487 on Build GRCh38	Gain+Loss	BAHCC1 NPLOC4 HGS MIR657 MIR1250 LOC100129503 BAIAP2-AS1 ARL16 LOC400627 AATK-AS1 LOC107985022 SLC38A10 TMEM105 CHMP6 FAAP100 CCDC137 SLC25A10 MIR6786 TEPSIN AATK LINC00482 TSPAN10 BAIAP2 LOC107985021 CEP131 MRPL12 MIR4740 MIR338 FSCN2 MIR3065 LOC105371921 OXLD1 PDE6G MIR3186 LOC105371925 LOC101928855 RPTOR ACTG1 LOC100130370 C17orf89
esv3893051	Chr.17:81244320 - 81272804 on Build GRCh38	Gain	SLC38A10
nsv428351	Chr.17:81152631 - 83064073 on Build GRCh38	Gain	BAHCC1 NPLOC4 CD7 B3GNTL1 LOC101929552 FASN HGS NOTUM DUS1L FN3KRP PCYT2 ARL16 AATK-AS1 ANAPC11 DCXR MYADML2 SLC38A10 RFNG FOXK2 CCDC137 FN3K SLC25A10 TEPSIN P4HB PYCR1 WDR45B AATK STRA13 LINC00482 GPS1 SLC16A3 UTS2R ALYREF SECTM1 MRPL12 ZNF750 CCDC57 FSCN2 OXLD1 LRRC45 PDE6G MIR3186 GCGR LOC100130370 C17orf89 ARHGDIA HEXDC MIR6787 CSNK1D MAFG-AS1 TBCD OGFOD3 TMEM105 FAAP100 NPB MAFG C17orf62 NARF LOC101929511 SIRT7 LOC105376791 RAB40B MIR6786 ASPSCR1 SNORD134 TEX19 TSPAN10 CEP131 PPP1R27 MIR4740 LOC105376790 MCRIP1 LOC105371925 RAC3 ACTG1 LOC105371944 MIR4525
dgv46n68	Chr.17:81133921 - 81288932 on Build GRCh38	Loss	TEPSIN AATK-AS1 SLC38A10 AATK LOC105371925 CEP131 C17orf89
nsv457971	Chr.17:81216762 - 81282974 on Build GRCh38	Loss	TEPSIN SLC38A10 LOC105371925 CEP131 C17orf89
nsv470619	Chr.17:81032233 - 81349843 on Build GRCh38	Loss	TEPSIN AATK LINC00482 BAIAP2 CEP131 MIR657 MIR1250 MIR338 BAIAP2-AS1 AATK-AS1 MIR3065 SLC38A10 TMEM105 LOC105371925 C17orf89
nsv1160499	Chr.17:81235307 - 81320655 on Build GRCh38	Deletion	TEPSIN SLC38A10 TMEM105 LINC00482 C17orf89
nsv1064123	Chr.17:81168449 - 81282457 on Build GRCh38	Gain	TEPSIN AATK-AS1 SLC38A10 LOC105371925 CEP131 C17orf89
nsv952389	Chr.17:81137501 - 81593774 on Build GRCh38	Deletion	TEPSIN BAHCC1 NPLOC4 AATK LINC00482 CEP131 MIR4740 FSCN2 AATK-AS1 SLC38A10 TMEM105 MIR3186 FAAP100 LOC105371925 ACTG1 LOC100130370 C17orf89
nsv509677	Chr.17:81227139 - 81267309 on Build GRCh38	Insertion	TEPSIN SLC38A10 LOC105371925 C17orf89

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

amino acid transporter

Gene Ontology Categories:

Process(es)

amino acid transmembrane transport
sodium ion transport
amino acid transport
bone development

Function(s)

amino acid transmembrane transporter activity