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See other ACAP3 CNV Assays ›
Gene Symbol
ACAP3
Assay Reference Genome
Location

Chr.1:1292880 on build GRCh38
Cytoband
1p36.33
Assay ID Hs03386018_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 116983

Gene Name:

 ArfGAP with coiled-coil, ankyrin repeat and PH domains 3

Gene Aliases:

 CENTB5

Location:

 Chr.1:1292384-1307925 on Build GRCh38

Assay Gene Location:

 Within Exon 25
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ACAP3 NM_030649.2 24 3263 NP_085152.2
XM_005244715.2 23 3200 XP_005244772.1
XM_005244717.3 12 2257 XP_005244774.1
XM_011540606.2 24 3312 XP_011538908.1
XM_011540607.1 24 5736 XP_011538909.1
XM_011540608.2 23 3217 XP_011538910.1
XM_011540609.2 23 3214 XP_011538911.1
XM_017000233.1 24 3452 XP_016855722.1
AB051503.1 22 4829 BAB21807.1
AK093954.1 BAC04257.1
BC004874.2 9 1867 AAH04874.2
BC021851.1 7 1653 AAH21851.1
BC029929.1 4 1066 AAH29929.1
BC051194.1 24 3263 AAH51194.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv817616 Chr.1:1257135 - 1306704 on Build GRCh38 Loss UBE2J2 SCNN1D ACAP3 MIR6726
nsv544965 Chr.1:1217251 - 1306704 on Build GRCh38 Loss SDF4 UBE2J2 B3GALT6 FAM132A SCNN1D ACAP3 MIR6726
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss FAM87B LOC105378589 DDX11L1 SCNN1D PRKCZ LOC729737 TTLL10-AS1 MTND1P23 MIR6723 LOC100287934 DVL1 LOC100506504 TAS1R3 SDF4 MIR6859-2 MMP23A CCNL2 MXRA8 ATAD3C ANKRD65 OR4F5 LOC100133331 LOC100130417 C1orf159 MIR6808 ATAD3B LOC148413 KLHL17 UBE2J2 ISG15 MMP23B CDK11A LOC102725121 LOC107985729 WASH7P VWA1 LINC01342 LINC00115 CPSF3L PUSL1 RNF223 NADK CPTP MIR6726 TNFRSF4 TMEM52 ACAP3 MIR429 SAMD11 SKI CALML6 SSU72 MIR6859-1 MTND2P28 PERM1 TTLL10 LOC100134822 LOC100288069 MRPL20 LOC105378948 TNFRSF18 LOC107984841 OR4F16 B3GALT6 ATAD3A LOC100288175 MIR1302-2 OR4F29 MIR200B LOC105378947 LOC105378949 PLEKHN1 MIR200A NOC2L FAAP20 CDK11B LOC107985728 LOC100129534 MIB2 LOC101928626 FAM138A FNDC10 TMEM240 LOC102724312 LOC105378592 TMEM88B HES4 GABRD SLC35E2 LOC105378591 FAM41C LOC100132287 FAM132A AGRN SLC35E2B GNB1 MIR6727 LINC01128 AURKAIP1 MORN1 LOC284600 CFAP74
nsv544969 Chr.1:1290683 - 1374597 on Build GRCh38 Loss TAS1R3 PUSL1 MXRA8 SCNN1D MIR6808 ACAP3 MIR6727 DVL1 CPTP MIR6726 AURKAIP1 CPSF3L
nsv470680 Chr.1:1070426 - 1378635 on Build GRCh38 Loss UBE2J2 SCNN1D TTLL10 TNFRSF18 TTLL10-AS1 B3GALT6 LINC01342 DVL1 MIR200B CPSF3L TAS1R3 SDF4 PUSL1 MXRA8 RNF223 FAM132A MIR6727 MIR200A CPTP MIR6726 AURKAIP1 TNFRSF4 C1orf159 MIR6808 ACAP3 MIR429
nsv1160788 Chr.1:1282706 - 1376336 on Build GRCh38 Deletion TAS1R3 PUSL1 MXRA8 SCNN1D MIR6808 ACAP3 MIR6727 DVL1 CPTP MIR6726 AURKAIP1 CPSF3L
nsv1160772 Chr.1:1027585 - 1333467 on Build GRCh38 Duplication UBE2J2 SCNN1D TTLL10 LOC105378948 TNFRSF18 TTLL10-AS1 B3GALT6 LINC01342 LOC100288175 MIR200B CPSF3L TAS1R3 SDF4 PUSL1 RNF223 FAM132A AGRN MIR6727 MIR200A CPTP MIR6726 TNFRSF4 C1orf159 ACAP3 MIR429
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss SSU72 FAM87B PERM1 SCNN1D TTLL10 LOC100288069 MRPL20 LOC105378948 TNFRSF18 TTLL10-AS1 B3GALT6 ATAD3A LOC100287934 DVL1 LOC100288175 MIR200B TAS1R3 SDF4 MMP23A CCNL2 MXRA8 PLEKHN1 ATAD3C ANKRD65 MIR200A NOC2L CDK11B LOC100130417 LOC107985728 MIB2 C1orf159 MIR6808 ATAD3B FNDC10 TMEM240 LOC148413 KLHL17 UBE2J2 LOC102724312 ISG15 TMEM88B HES4 MMP23B SLC35E2 CDK11A LOC107985729 VWA1 LINC01342 LINC00115 CPSF3L PUSL1 FAM41C RNF223 FAM132A AGRN SLC35E2B NADK MIR6727 LINC01128 CPTP MIR6726 AURKAIP1 TNFRSF4 ACAP3 MIR429 SAMD11 LOC284600
nsv1000169 Chr.1:1281678 - 1362354 on Build GRCh38 Gain TAS1R3 PUSL1 MXRA8 SCNN1D MIR6808 ACAP3 MIR6727 DVL1 CPTP MIR6726 CPSF3L
nsv950452 Chr.1:1106921 - 1637538 on Build GRCh38 Deletion LOC148413 SSU72 UBE2J2 SCNN1D LOC102724312 TTLL10 TMEM88B MMP23B MRPL20 TNFRSF18 TTLL10-AS1 B3GALT6 ATAD3A LOC107985729 VWA1 LINC01342 DVL1 MIR200B CPSF3L TAS1R3 SDF4 PUSL1 CCNL2 MXRA8 ATAD3C FAM132A ANKRD65 MIR6727 MIR200A CPTP CDK11B MIR6726 AURKAIP1 MIB2 TNFRSF4 C1orf159 MIR6808 ACAP3 MIR429 ATAD3B FNDC10 TMEM240
esv2758912 Chr.1:1263940 - 1384492 on Build GRCh38 Loss TAS1R3 PUSL1 UBE2J2 MXRA8 SCNN1D MIR6727 CPTP MIR6726 AURKAIP1 MIR6808 ACAP3 DVL1 CPSF3L
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain LOC148413 KLHL17 UBE2J2 PERM1 SCNN1D TTLL10 ISG15 TMEM88B HES4 MRPL20 LOC105378948 TNFRSF18 TTLL10-AS1 B3GALT6 LINC01342 DVL1 LOC100288175 MIR200B CPSF3L TAS1R3 SDF4 PUSL1 CCNL2 MXRA8 PLEKHN1 RNF223 FAM132A AGRN ANKRD65 MIR6727 MIR200A NOC2L CPTP LOC100130417 MIR6726 AURKAIP1 LOC107985728 TNFRSF4 C1orf159 MIR6808 ACAP3 MIR429 SAMD11 LOC284600
nsv469848 Chr.1:1146082 - 1322235 on Build GRCh38 Gain SDF4 PUSL1 UBE2J2 FAM132A SCNN1D MIR6727 MIR200A TTLL10 MIR6726 TNFRSF18 TNFRSF4 TTLL10-AS1 B3GALT6 ACAP3 MIR429 MIR200B CPSF3L

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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