Hs03461504_cn

• Gene Symbol: MKRN2
• Assay Reference Genome Location: Chr.3:12560950 on build GRCh38
• Cytoband: 3p25.2

Target Gene Details

• Entrez Gene ID: 23609
• Gene Name: makorin ring finger protein 2
• Gene Aliases: HSPC070, RNF62
• Location: Chr.3:12557014-12583713 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
MKRN2	NM_001271707.1			NP_001258636.1
	NM_014160.4			NP_054879.3
	AF302084.1			AAG30426.1
	AK091318.1
	AK298463.1
	BC015715.1			AAH15715.1
	DR157266.1

Target Gene Details

• Entrez Gene ID: 100129480
• Gene Name: MKRN2 opposite strand
• Gene Aliases: C3orf83, MKRN2-AS1
• Location: Chr.3:12539713-12561227 on Build GRCh38
• Assay Gene Location: Within Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
MKRN2OS	XM_006712909.3	1	278	XP_006712972.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv3575548	Chr.3:12521381 - 12631860 on Build GRCh38	Gain	MKRN2OS RAF1 MKRN2 TSEN2
nsv1000995	Chr.3:12308425 - 12594756 on Build GRCh38	Gain	MKRN2OS RAF1 PPARG MKRN2 TSEN2
nsv1147269	Chr.3:11914420 - 12871937 on Build GRCh38	Deletion	MKRN2OS TMEM40 CAND2 RAF1 PPARG SNORA7A MKRN2 TSEN2 RPL32 SYN2 TIMP4
nsv1112379	Chr.3:11914395 - 12871920 on Build GRCh38	Deletion	MKRN2OS TMEM40 CAND2 RAF1 PPARG SNORA7A MKRN2 TSEN2 RPL32 SYN2 TIMP4
esv2751977	Chr.3:12452779 - 12887049 on Build GRCh38	Gain	MKRN2OS TMEM40 CAND2 RAF1 PPARG SNORA7A MKRN2 TSEN2 RPL32 LOC105376955
dgv850e199	Chr.3:11914188 - 12872013 on Build GRCh38	Deletion	MKRN2OS TMEM40 CAND2 RAF1 PPARG SNORA7A MKRN2 TSEN2 RPL32 SYN2 TIMP4
dgv763e201	Chr.3:11909121 - 12871926 on Build GRCh38	Deletion	MKRN2OS TMEM40 CAND2 RAF1 PPARG SNORA7A MKRN2 TSEN2 RPL32 SYN2 TIMP4

More Information

• Set Membership: Intragenic, Exonic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

ubiquitin-protein ligase

Gene Ontology Categories:

Process(es)

biological_process
protein ubiquitination

Function(s)

protein binding
zinc ion binding
ligase activity
poly(A) RNA binding