Hs03927751_cn

• Gene Symbol: NECAB2
• Assay Reference Genome Location: Chr.16:83985878 on build GRCh38
• Cytoband: 16q23.3

Target Gene Details

• Entrez Gene ID: 54550
• Gene Name: N-terminal EF-hand calcium binding protein 2
• Gene Aliases: EFCBP2
• Location: Chr.16:83968632-84002776 on Build GRCh38
• Assay Gene Location: Within Intron 5

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
NECAB2	NM_019065.2			NP_061938.2
	XM_011523135.1			XP_011521437.1
	XM_017023317.1			XP_016878806.1
	AF070637.1			AAC25392.1
	AF193758.1			AAG28414.1
	AK127376.1			BAC86948.1
	AY299331.1			AAP57260.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv3572242	Chr.16:83975928 - 84007908 on Build GRCh38	Gain	NECAB2
nsv528396	Chr.16:83937637 - 84050522 on Build GRCh38	Loss	OSGIN1 NECAB2 LOC105371371 SLC38A8
nsv1065790	Chr.16:83830329 - 84243597 on Build GRCh38	Loss	HSDL1 LOC729887 MLYCD KCNG4 OSGIN1 DNAAF1 NECAB2 TAF1C LOC105371371 ADAD2 SLC38A8 MBTPS1
esv3639405	Chr.16:83969606 - 84018131 on Build GRCh38	Loss	NECAB2 SLC38A8
dgv5259n54	Chr.16:83956484 - 84010961 on Build GRCh38	Loss	OSGIN1 NECAB2 SLC38A8
dgv3056n100	Chr.16:83923502 - 84039073 on Build GRCh38	Loss	OSGIN1 NECAB2 LOC105371371 SLC38A8
nsv471106	Chr.16:83921780 - 84014793 on Build GRCh38	Gain	OSGIN1 NECAB2 LOC105371371 SLC38A8

More Information

Additional Information:

For this assay, SNP(s) [rs75244824] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Function(s)

calcium ion binding
protein binding