Hs03959415_cn

• Gene Symbol: USP43
• Assay Reference Genome Location: Chr.17:9646893 on build GRCh38
• Cytoband: 17p13.1

Target Gene Details

• Entrez Gene ID: 124739
• Gene Name: ubiquitin specific peptidase 43
• Gene Aliases: -
• Location: Chr.17:9643493-9729687 on Build GRCh38
• Assay Gene Location: Within Intron 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
USP43	NM_001267576.1			NP_001254505.1
	NM_153210.4			NP_694942.3
	XM_011523639.2			XP_011521941.1
	XM_011523640.1			XP_011521942.1
	XM_011523641.1			XP_011521943.1
	XM_011523642.2			XP_011521944.1
	XM_017024159.1			XP_016879648.1
	XM_017024162.1			XP_016879651.1
	AJ583817.2			CAE47744.2
	AK055188.1			BAB70869.1
	BC136368.1
	BC144041.1
	BC171759.1
	DA769847.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv833358	Chr.17:9643743 - 9828246 on Build GRCh38	Gain	GLP2R DHRS7C USP43 GSG1L2
nsv833357	Chr.17:9518357 - 9696606 on Build GRCh38	Loss	STX8 USP43 CFAP52

More Information

Additional Information:

For this assay, SNP(s) [rs73255710] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

cysteine protease

Gene Ontology Categories:

Process(es)

ubiquitin-dependent protein catabolic process
protein deubiquitination
translesion synthesis

Function(s)

ISG15-specific protease activity
thiol-dependent ubiquitinyl hydrolase activity