Genomic Map
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Target Gene Details
Entrez Gene ID: | 3978 |
Gene Name: | DNA ligase 1 |
Gene Aliases: |
- |
Location: |
Chr.19:48115445-48170603 on Build GRCh38 |
Assay Gene Location: | Within Intron 13 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| LIG1 | NM_000234.2 | NP_000225.1 | ||
| NM_001289063.1 | NP_001275992.1 | |||
| NM_001289064.1 | NP_001275993.1 | |||
| NM_001320970.1 | NP_001307899.1 | |||
| NM_001320971.1 | NP_001307900.1 | |||
| NR_110296.1 | ||||
| NR_135497.1 | ||||
| NR_135498.1 | ||||
| NR_135499.1 | ||||
| NR_135500.1 | ||||
| NR_135501.1 | ||||
| XM_017026809.1 | XP_016882298.1 | |||
| AB208791.1 | BAD92028.1 | |||
| AK225863.1 | ||||
| AK297296.1 | ||||
| AK300370.1 | ||||
| AK300607.1 | ||||
| AK303644.1 | ||||
| AK314210.1 | ||||
| BC108318.1 | AAI08319.1 | |||
| BC110622.2 | AAI10623.1 | |||
| M36067.1 | AAA59518.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv833853 | Chr.19:47982539 - 48184317 on Build GRCh38 | Loss |
 LIG1
BSPH1
CABP5
C19orf68
PLA2G4C
ELSPBP1
PLA2G4C-AS1
|
| nsv9739 | Chr.19:47901840 - 50143063 on Build GRCh38 | Gain+Loss |
LMTK3
SNAR-A4
SNAR-A3
EMP3
NUCB1-AS1
DKKL1
SNAR-A1
CYTH2
FGF21
MIR5088
SEC1P
MIR4751
PTH2
PLA2G4C-AS1
MIR4324
SLC17A7
BSPH1
NTF4
MED25
SPHK2
NUP62
LIN7B
ZNF473
SNAR-A7
CCDC155
GFY
SNAR-C1
SNORD33
CA11
MIR4750
LHB
CCDC114
LOC101059948
LOC101928295
FCGRT
SIGLEC16
PTOV1-AS1
AKT1S1
SNAR-G1
CPT1C
TSKS
PPFIA3
ADM5
MIR150
TMEM143
SNORD32A
HSD17B14
CGB2
RPL13A
SULT2B1
FUZ
FLT3LG
PTOV1-AS2
FTL
SNAR-A8
SNAR-A6
CARD8-AS1
LOC105372430
SLC6A16
CGB1
CGB3
SNAR-C5
CABP5
TBC1D17
GRIN2D
SCAF1
CARD8
ATF5
NOSIP
PRMT1
CD37
C19orf68
FUT2
SNAR-B2
BCL2L12
RPL18
SNAR-D
IL4I1
MIR6800
LOC100287477
FAM83E
LOC105447645
SNAR-A2
KCNA7
SNAR-A13
PRR12
TULP2
SNRNP70
RASIP1
FUT1
BCAT2
GRWD1
IZUMO1
SNAR-C4
DBP
MIR4749
CGB7
PLEKHA4
RCN3
LIG1
SNAR-C3
SNAR-A10
PLA2G4C
PIH1D1
NUCB1
SNAR-A12
RRAS
MAMSTR
KDELR1
SNAR-A5
SNAR-B1
C19orf73
TEAD2
SYNGR4
TRPM4
PNKP
ELSPBP1
SNAR-A14
RUVBL2
SNAR-A9
SNORD34
SPACA4
GYS1
NTN5
CGB8
PTOV1
SNORD35B
BAX
KCNJ14
MIR6798
SNAR-G2
RPS11
PRRG2
HRC
ZNF114
VRK3
PPP1R15A
SIGLEC11
SNORD35A
AP2A1
IRF3
SNAR-A11
SNAR-C2
CGB5
ALDH16A1
DHDH
MIR6799
FLJ26850
|
| esv34181 | Chr.19:48009377 - 48416682 on Build GRCh38 | Loss |
GRIN2D
KDELR1
CARD8
EMP3
CARD8-AS1
SYNGR4
ZNF114
C19orf68
TMEM143
ELSPBP1
LIG1
CCDC114
CABP5
PLA2G4C
PLA2G4C-AS1
|
Back To TopMore Information
Set Membership: |
Intragenic
Intronic
Non-exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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