Hs04556821_cn

• Gene Symbol: CTDSP1
• Assay Reference Genome Location: Chr.2:218399456 on build GRCh38
• Cytoband: 2q35

Target Gene Details

• Entrez Gene ID: 58190
• Gene Name: CTD small phosphatase 1
• Gene Aliases: NIF3, NLI-IF, NLIIF, SCP1
• Location: Chr.2:218398338-218405941 on Build GRCh38
• Assay Gene Location: Within Exon 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CTDSP1	NM_001206878.1			NP_001193807.1
	XM_017004617.1	1	284	XP_016860106.1
	BX424971.2
	BX446444.2

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv519829	Chr.2:218286495 - 218403058 on Build GRCh38	Loss	CATIP-AS1 PNKD CATIP-AS2 MIR6810 CATIP SLC11A1 MIR26B CTDSP1 TMBIM1
nsv3166	Chr.2:218371765 - 218405183 on Build GRCh38	Insertion	SLC11A1 MIR26B CTDSP1

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

negative regulation of protein phosphorylation
regulation of transcription from RNA polymerase II promoter
protein dephosphorylation
negative regulation of neuron differentiation
negative regulation of G1/S transition of mitotic cell cycle

Function(s)

protein binding
CTD phosphatase activity
metal ion binding