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See other AKR1C3 CNV Assays ›
Gene Symbol
AKR1C3
Assay Reference Genome
Location

Chr.10:5078888 on build GRCh38
Cytoband
10p15.1
Assay ID Hs05202215_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 8644

Gene Name:

 aldo-keto reductase family 1, member C3

Gene Aliases:

 DD3, DDX, HA1753, HAKRB, HAKRe, HSD17B5, PGFS, hluPGFS

Location:

 Chr.10:5048766-5107686 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
AKR1C3 NM_001253908.1 NP_001240837.1
AK296829.1
DQ269985.1 ABB76132.1
H79159.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1161924 Chr.10:5067963 - 5090996 on Build GRCh38 Duplication AKR1C3
esv3891742 Chr.10:4974605 - 5101845 on Build GRCh38 Loss AKR1C1 AKR1C3 AKR1C2
esv2763913 Chr.10:4918829 - 5279444 on Build GRCh38 Gain+Loss AKR1C1 AKR1C3 AKR1C2 AKR1C4 AKR1C8P
nsv549881 Chr.10:4859606 - 5277716 on Build GRCh38 Loss AKR1C1 AKR1E2 AKR1C6P AKR1C3 AKR1C2 AKR1C4 AKR1C8P
nsv1036566 Chr.10:4971312 - 5219463 on Build GRCh38 Loss AKR1C1 AKR1C3 AKR1C2 AKR1C4 AKR1C8P
nsv549882 Chr.10:4901326 - 5161901 on Build GRCh38 Loss AKR1C1 AKR1E2 AKR1C6P AKR1C3 AKR1C2 AKR1C8P
esv3622214 Chr.10:4972626 - 5103318 on Build GRCh38 Loss AKR1C1 AKR1C3 AKR1C2
nsv1045155 Chr.10:4830047 - 5169355 on Build GRCh38 Loss AKR1C1 AKR1E2 AKR1C6P AKR1C3 AKR1C2 AKR1C8P
nsv549883 Chr.10:4983904 - 5233799 on Build GRCh38 Loss AKR1C3 AKR1C2 AKR1C4 AKR1C8P
nsv1050246 Chr.10:4885236 - 5169355 on Build GRCh38 Gain AKR1C1 AKR1E2 AKR1C6P AKR1C3 AKR1C2 AKR1C8P
nsv1039386 Chr.10:4966191 - 5344882 on Build GRCh38 Gain AKR1C1 AKR1C3 AKR1C2 AKR1C4 AKR1C8P

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More Information


Additional Information:

For this assay, SNP(s) [rs111537719] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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