Hs05506196_cn

• Gene Symbol: B3GNTL1
• Assay Reference Genome Location: Chr.17:82950028 on build GRCh38
• Cytoband: 17q25.3

Target Gene Details

• Entrez Gene ID: 146712
• Gene Name: UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1
• Gene Aliases: 3-Gn-T8, B3GNT8, BGnT-8, beta-1, beta3Gn-T8, beta3GnTL1
• Location: Chr.17:82942149-83051845 on Build GRCh38
• Assay Gene Location: Within Intron 18

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
B3GNTL1	NM_001009905.2			NP_001009905.1
	NM_001320742.1			NP_001307671.1
	NM_001320743.1			NP_001307672.1
	NR_135465.1
	NR_135466.1
	XM_006722272.3			XP_006722335.1
	XM_011523532.2			XP_011521834.1
	XM_011523535.1			XP_011521837.1
	XM_017024205.1			XP_016879694.1
	XM_017024206.1			XP_016879695.1
	AK054757.1
	AY304503.1			AAQ74775.1
	AY634364.1			AAT47555.1
	BC019623.1			AAH19623.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1067553	Chr.17:82530808 - 83091923 on Build GRCh38	Loss	LOC101929552 TBCD MIR4525 RAB40B WDR45B METRNL FOXK2 LOC105371944 FN3KRP LOC105376791 FN3K ZNF750 B3GNTL1
dgv3296n100	Chr.17:82851564 - 83091923 on Build GRCh38	Gain	LOC105371944 TBCD METRNL B3GNTL1
nsv428351	Chr.17:81152631 - 83064073 on Build GRCh38	Gain	CSNK1D SLC16A3 HGS SIRT7 AATK HEXDC ARHGDIA CCDC57 FOXK2 LOC105371944 ALYREF LOC101929511 TEX19 AATK-AS1 LOC105376791 ZNF750 FSCN2 SNORD134 SLC25A10 ASPSCR1 MYADML2 MIR6787 LOC101929552 MIR4525 PCYT2 SLC38A10 ANAPC11 NARF CD7 LOC105376790 MIR3186 GPS1 FN3KRP C17orf62 DUS1L FAAP100 FN3K FASN NPB UTS2R MIR6786 NOTUM MAFG-AS1 GCGR PYCR1 RAC3 P4HB TMEM105 NPLOC4 MRPL12 PDE6G ACTG1 LINC00482 C17orf89 LRRC45 MAFG TBCD BAHCC1 LOC100130370 STRA13 MIR4740 RAB40B MCRIP1 OXLD1 OGFOD3 WDR45B ARL16 TSPAN10 CEP131 RFNG CCDC137 PPP1R27 LOC105371925 TEPSIN SECTM1 B3GNTL1 DCXR
nsv576217	Chr.17:82937869 - 82960820 on Build GRCh38	Loss	LOC105371944 TBCD B3GNTL1
nsv529032	Chr.17:82946968 - 82963153 on Build GRCh38	Loss	B3GNTL1
dgv3297n100	Chr.17:82879855 - 83048753 on Build GRCh38	Gain	LOC105371944 TBCD B3GNTL1
esv3893052	Chr.17:82895301 - 83102003 on Build GRCh38	Gain	LOC105371944 TBCD METRNL B3GNTL1
nsv1057153	Chr.17:82876571 - 83091923 on Build GRCh38	Loss	LOC105371944 TBCD METRNL B3GNTL1
nsv1063195	Chr.17:82947423 - 82998143 on Build GRCh38	Gain	B3GNTL1
esv21913	Chr.17:81828123 - 83103548 on Build GRCh38	Gain+Loss	CSNK1D SLC16A3 SIRT7 HEXDC ARHGDIA METRNL CCDC57 FOXK2 LOC105371944 ALYREF LOC101929511 TEX19 LOC105376791 ZNF750 SNORD134 ASPSCR1 MYADML2 MIR6787 LOC101929552 MIR4525 PCYT2 ANAPC11 NARF CD7 LOC105376790 GPS1 FN3KRP C17orf62 DUS1L FN3K FASN NPB UTS2R NOTUM MAFG-AS1 PYCR1 RAC3 P4HB LRRC45 MAFG TBCD STRA13 RAB40B MCRIP1 OGFOD3 WDR45B RFNG PPP1R27 SECTM1 B3GNTL1 DCXR

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

glycosyltransferase

Gene Ontology Categories:

Function(s)

transferase activity, transferring glycosyl groups