Name: [Hs06143159_cn] [DAXX]
Creator: Thermo Fisher Scientific
Keywords: [DAXX] Assay, [death domain associated protein] Assay

Genomic Map

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Assay Details

Target Gene Details

Entrez Gene ID:	1616
Gene Name:	death domain associated protein
Gene Aliases:	BING2, DAP6, EAP1
Location:	Chr.6:33318558-33323016 on Build GRCh38
Assay Gene Location:	Within Intron 1

Gene Symbol	Transcript Accession	Protein ID
DAXX	NM_001141969.1	NP_001135441.1
	NM_001141970.1	NP_001135442.1
	NM_001254717.1	NP_001241646.1
	NM_001350.4	NP_001341.1
	XM_005248860.3	XP_005248917.1
	AF039136.1	AAB92671.1
	AF050179.1	AAC39853.1
	AK223404.1	BAD97124.1
	AK292187.1
	AK303767.1
	AK303854.1
	AK309612.1
	AK313034.1
	BC109073.1	AAI09074.1
	BC109074.1	AAI09075.1
	DC345308.1
	DC359186.1

Target Copy Number Variation Details

DGV Version:

Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv830635	Chr.6:33270228 - 33446010 on Build GRCh38	Loss	MIR6834 WDR46 TAPBP RGL2 DAXX ZBTB22 PFDN6 RPS18 CUTA PHF1 B3GALT4 MIR5004 VPS52 KIFC1 MIR6873 SYNGAP1
nsv1073969	Chr.6:31456422 - 33480523 on Build GRCh38	Deletion	MIR6834 TAP1 CFB MIR3135B ZBTB22 PSMB9 LTA LY6G6D BAG6 PSMB8 ZBTB9 PHF1 HCG25 NEU1 HLA-DRA LTB SAPCD1 LST1 HSPA1L RNF5 BTNL2 NELFE TAP2 DAXX HCG23 DXO LY6G5B CUTA AGER HLA-DQA2 LOC100294145 DDX39B CYP21A2 MIR6873 LOC101929163 PSMB8-AS1 MIR6721 NCR3 HCG24 C4B PFDN6 RPS18 GPSM3 AIF1 SNORD84 C6orf25 APOM SKIV2L PPT2-EGFL8 HLA-DQA1 DDAH2 MICB HLA-DPB2 MSH5-SAPCD1 HLA-DMA C6orf47 C2-AS1 SNORD117 HSPA1B BRD2 SNORD48 HCP5 PRRT1 C6orf10 MIR4646 VWA7 LY6G6F CSNK2B ABHD16A HLA-DMB WDR46 TAPBP HLA-DPA1 SNORA38 RGL2 HLA-DRB1 HLA-DOB LY6G6C RING1 ZBTB12 HSD17B8 SLC44A4 HLA-DRB6 TNXA CLIC1 C2 PRRC2A LY6G6E LY6G5C HLA-DQB1 EGFL8 LSM2 HLA-DRB5 HLA-DPB1 C4A STK19 NFKBIL1 CYP21A1P KIFC1 PPT2 PBX2 FKBPL SYNGAP1 NOTCH4 MIR6833 RXRB EHMT2 SLC39A7 DDX39B-AS1 HLA-DQB1-AS1 B3GALT4 MIR5004 VPS52 COL11A2 PPP1R2P1 LOC100287329 MIR219A1 ATF6B MCCD1 TNXB TNF HLA-DQB2 HSPA1A AGPAT1 VARS ATP6V1G2 HCG26 LOC100507547 GPANK1 MIR6832 LOC102725068 MIR1236 HLA-DOA ATP6V1G2-DDX39B MSH5 C6orf48 SNORD52 SAPCD1-AS1
esv22635	Chr.6:33321734 - 33328508 on Build GRCh38	Loss	DAXX
nsv830634	Chr.6:33193440 - 33362968 on Build GRCh38	Loss	MIR6834 WDR46 TAPBP RXRB RGL2 DAXX ZBTB22 SLC39A7 RING1 PFDN6 RPS18 HSD17B8 B3GALT4 HCG25 VPS52 MIR6873 MIR219A1
nsv1112900	Chr.6:31455323 - 33480423 on Build GRCh38	Deletion	MIR6834 TAP1 CFB MIR3135B ZBTB22 PSMB9 LTA LY6G6D BAG6 PSMB8 ZBTB9 PHF1 HCG25 NEU1 HLA-DRA LTB SAPCD1 LST1 HSPA1L RNF5 BTNL2 NELFE TAP2 DAXX HCG23 DXO LY6G5B CUTA AGER HLA-DQA2 LOC100294145 DDX39B CYP21A2 MIR6873 LOC101929163 PSMB8-AS1 MIR6721 NCR3 HCG24 C4B PFDN6 RPS18 GPSM3 AIF1 SNORD84 C6orf25 APOM SKIV2L PPT2-EGFL8 HLA-DQA1 DDAH2 MICB HLA-DPB2 MSH5-SAPCD1 HLA-DMA C6orf47 C2-AS1 SNORD117 HSPA1B BRD2 SNORD48 HCP5 PRRT1 C6orf10 MIR4646 VWA7 LY6G6F CSNK2B ABHD16A HLA-DMB WDR46 TAPBP HLA-DPA1 SNORA38 RGL2 HLA-DRB1 HLA-DOB LY6G6C RING1 ZBTB12 HSD17B8 SLC44A4 HLA-DRB6 TNXA CLIC1 C2 PRRC2A LY6G6E LY6G5C HLA-DQB1 EGFL8 LSM2 HLA-DRB5 HLA-DPB1 C4A STK19 NFKBIL1 CYP21A1P KIFC1 PPT2 PBX2 FKBPL SYNGAP1 NOTCH4 MIR6833 RXRB EHMT2 SLC39A7 DDX39B-AS1 HLA-DQB1-AS1 B3GALT4 MIR5004 VPS52 COL11A2 PPP1R2P1 LOC100287329 MIR219A1 ATF6B MCCD1 TNXB TNF HLA-DQB2 HSPA1A AGPAT1 VARS ATP6V1G2 HCG26 LOC100507547 GPANK1 MIR6832 LOC102725068 MIR1236 HLA-DOA ATP6V1G2-DDX39B MSH5 C6orf48 SNORD52 SAPCD1-AS1
nsv1119076	Chr.6:32595823 - 33480623 on Build GRCh38	Deletion	MIR6834 HLA-DMB WDR46 TAPBP PSMB8-AS1 TAP1 RXRB HLA-DPA1 HCG24 RGL2 MIR3135B ZBTB22 PSMB9 HLA-DOB SLC39A7 RING1 PFDN6 RPS18 HLA-DQB1-AS1 HSD17B8 PSMB8 ZBTB9 PHF1 B3GALT4 MIR5004 HCG25 VPS52 COL11A2 PPP1R2P1 MIR219A1 HLA-DQB1 HLA-DQA1 HLA-DQB2 HLA-DPB1 HLA-DPB2 HLA-DMA TAP2 DAXX BRD2 CUTA HLA-DOA KIFC1 HLA-DQA2 LOC100294145 MIR6873 SYNGAP1