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See other ESRRA CNV Assays ›
Gene Symbol
ESRRA
Assay Reference Genome
Location

Chr.11:64305546 on build GRCh38
Cytoband
11q13.1
Assay ID Hs06278814_cn
Size
Availability Made To Order
Catalog # 4400291
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Target Gene Details

Entrez Gene ID:

2101

Gene Name:

estrogen related receptor alpha

Gene Aliases:

ERR1, ERRa, ERRalpha, ESRL1, NR3B1

Location:

Chr.11:64305528-64316743 on Build GRCh38

Assay Gene Location:

Overlaps - Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ESRRA NM_001282451.1 NP_001269380.1
NM_004451.4 NP_004442.3
BC063795.1
BC073956.1 AAH73956.1
DB478332.1
L38487.1 AAB17015.1

Target Copy Number Variation Details

DGV Version:

Release date: 2016-05-15, GRCh GRCh38
Target
Variation
Location CNV
Subtype
Genes
nsv951010 Chr.11:63942829 - 64352128 on Build GRCh38 Deletion PLCB3 KCNK4-TEX40 TRMT112 TRPT1 KCNK4 STIP1 OTUB1 LOC105369340 FLRT1 MIR7155 FERMT3 TEX40 PRDX5 GPR137 BAD ESRRA NAA40 MACROD1 DNAJC4 NUDT22 VEGFB PPP1R14B FKBP2 CCDC88B COX8A
dgv1963n54 Chr.11:64174262 - 64329761 on Build GRCh38 Loss PLCB3 KCNK4-TEX40 FERMT3 TRMT112 TEX40 PRDX5 GPR137 TRPT1 BAD KCNK4 STIP1 ESRRA LOC105369340 DNAJC4 NUDT22 VEGFB PPP1R14B FKBP2
nsv832186 Chr.11:64204788 - 64402587 on Build GRCh38 Loss MIR7155 PLCB3 KCNK4-TEX40 FERMT3 TRMT112 TEX40 PRDX5 MIR1237 GPR137 TRPT1 BAD KCNK4 ESRRA LOC105369340 DNAJC4 RPS6KA4 NUDT22 VEGFB PPP1R14B FKBP2 CCDC88B
nsv469961 Chr.11:64055468 - 64318495 on Build GRCh38 Loss PLCB3 KCNK4-TEX40 FERMT3 TRMT112 TEX40 PRDX5 GPR137 TRPT1 BAD KCNK4 STIP1 ESRRA MACROD1 LOC105369340 DNAJC4 FLRT1 NUDT22 VEGFB PPP1R14B FKBP2
nsv357 Chr.11:64284335 - 64308789 on Build GRCh38 Insertion KCNK4-TEX40 TEX40 GPR137 BAD KCNK4 ESRRA
nsv1070042 Chr.11:64305427 - 64305728 on Build GRCh38 Deletion ESRRA

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More Information


Set Membership:

Intragenic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)

negative regulation of transcription from RNA polymerase II promoter
regulation of transcription, DNA-templated
transcription initiation from RNA polymerase II promoter
mitochondrion organization
intracellular receptor signaling pathway
response to estradiol
regulation of cell proliferation
steroid hormone mediated signaling pathway
regulation of osteoblast differentiation
regulation of osteoclast differentiation
positive regulation of transcription from RNA polymerase II promoter
cartilage development
positive regulation of cellular response to insulin stimulus
RNA polymerase II core promoter proximal region sequence-specific DNA binding
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding
DNA binding
steroid hormone receptor activity
RNA polymerase II transcription factor activity, ligand-activated sequence-specific DNA binding
steroid binding
protein binding
zinc ion binding
protein domain specific binding
sequence-specific DNA binding

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