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See other ALYREF CNV Assays ›
Gene Symbol
ALYREF
Assay Reference Genome
Location

Chr.17:81889948 on build GRCh38
Cytoband
17q25.3
Assay ID Hs07502907_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 10189

Gene Name:

 Aly/REF export factor

Gene Aliases:

 ALY, ALY/REF, BEF, REF, THOC4

Location:

 Chr.17:81887835-81891622 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ALYREF NM_005782.3 NP_005773.3
AF047002.1 AAD09608.1
AF086513.1
BC052302.1 AAH52302.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv33475 Chr.17:81871555 - 81891535 on Build GRCh38 Gain+Loss ANAPC11 ALYREF
esv3641407 Chr.17:81858294 - 81890680 on Build GRCh38 Gain ARHGDIA ALYREF P4HB
nsv952392 Chr.17:81885825 - 82065724 on Build GRCh38 Deletion NPB ALYREF STRA13 ASPSCR1 SIRT7 MAFG GPS1 MYADML2 ANAPC11 RFNG LRRC45 RAC3 NOTUM MAFG-AS1 PCYT2 PYCR1 DUS1L DCXR
nsv428351 Chr.17:81152631 - 83064073 on Build GRCh38 Gain WDR45B UTS2R FN3KRP ARHGDIA MIR6786 NARF P4HB PDE6G TBCD MIR4740 AATK-AS1 TEX19 ANAPC11 LRRC45 FASN DUS1L LOC101929552 ZNF750 OXLD1 PPP1R27 CD7 FN3K GPS1 MYADML2 FAAP100 LOC100130370 C17orf89 MIR3186 MAFG-AS1 MIR4525 SLC16A3 PCYT2 PYCR1 RAB40B CEP131 ALYREF FOXK2 CCDC57 OGFOD3 CCDC137 NPLOC4 AATK MAFG TMEM105 B3GNTL1 SLC38A10 LOC105371925 NOTUM BAHCC1 FSCN2 NPB MRPL12 STRA13 ARL16 ASPSCR1 SIRT7 TSPAN10 MCRIP1 LOC105376791 GCGR HGS LINC00482 LOC105371944 LOC105376790 RFNG ACTG1 C17orf62 LOC101929511 SECTM1 RAC3 TEPSIN CSNK1D SNORD134 HEXDC SLC25A10 MIR6787 DCXR
nsv470620 Chr.17:81516973 - 82064485 on Build GRCh38 Loss ARHGDIA MIR6786 ALYREF P4HB PDE6G CCDC137 NPLOC4 MAFG ANAPC11 LRRC45 NOTUM DUS1L FSCN2 NPB MRPL12 STRA13 ARL16 OXLD1 PPP1R27 ASPSCR1 SIRT7 TSPAN10 MCRIP1 GPS1 MYADML2 GCGR HGS FAAP100 RFNG RAC3 MAFG-AS1 PCYT2 PYCR1 SLC25A10 DCXR
nsv833569 Chr.17:81838937 - 82011412 on Build GRCh38 Loss NPB ARHGDIA ALYREF P4HB ASPSCR1 SIRT7 MAFG MYADML2 ANAPC11 NOTUM MAFG-AS1 PCYT2 PYCR1
esv21913 Chr.17:81828123 - 83103548 on Build GRCh38 Gain+Loss WDR45B UTS2R FN3KRP ARHGDIA NARF P4HB TBCD TEX19 ANAPC11 LRRC45 FASN DUS1L LOC101929552 ZNF750 PPP1R27 CD7 FN3K GPS1 MYADML2 MAFG-AS1 MIR4525 SLC16A3 PCYT2 PYCR1 METRNL RAB40B ALYREF FOXK2 CCDC57 OGFOD3 MAFG B3GNTL1 NOTUM NPB STRA13 ASPSCR1 SIRT7 MCRIP1 LOC105376791 LOC105371944 LOC105376790 RFNG C17orf62 LOC101929511 SECTM1 RAC3 CSNK1D SNORD134 HEXDC MIR6787 DCXR

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