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See other ALYREF CNV Assays ›
Gene Symbol
ALYREF
Assay Reference Genome
Location

Chr.17:81890783 on build GRCh38
Cytoband
17q25.3
Assay ID Hs07503693_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 10189

Gene Name:

 Aly/REF export factor

Gene Aliases:

 ALY, ALY/REF, BEF, REF, THOC4

Location:

 Chr.17:81887835-81891622 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 1 - Exon 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ALYREF NM_005782.3 NP_005773.3
AF047002.1 AAD09608.1
AF086513.1
BC052302.1 AAH52302.1

Target Gene Details

Entrez Gene ID:

 51529

Gene Name:

 anaphase promoting complex subunit 11

Gene Aliases:

 APC11, Apc11p, HSPC214

Location:

 Chr.17:81890790-81900533 on Build GRCh38

Assay Gene Location:

 Overlaps - Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ANAPC11 NM_001289414.1 NP_001276343.1
AA356010.1
AW965775.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv33475 Chr.17:81871555 - 81891535 on Build GRCh38 Gain+Loss ALYREF ANAPC11
nsv952392 Chr.17:81885825 - 82065724 on Build GRCh38 Deletion MAFG PYCR1 STRA13 ASPSCR1 DUS1L ANAPC11 RAC3 MYADML2 NPB SIRT7 NOTUM LRRC45 MAFG-AS1 RFNG GPS1 ALYREF DCXR PCYT2
nsv428351 Chr.17:81152631 - 83064073 on Build GRCh38 Gain SLC38A10 HEXDC BAHCC1 FASN B3GNTL1 NPLOC4 SLC16A3 LOC105376790 PPP1R27 RAC3 C17orf89 AATK-AS1 GCGR RFNG LOC100130370 ALYREF PCYT2 ARHGDIA NARF OGFOD3 PDE6G P4HB ASPSCR1 SNORD134 FN3KRP ARL16 WDR45B LRRC45 TMEM105 DCXR MCRIP1 MIR4525 SECTM1 LINC00482 MAFG SLC25A10 LOC101929511 C17orf62 PYCR1 MRPL12 FOXK2 LOC105376791 STRA13 DUS1L RAB40B TEX19 CCDC137 MYADML2 CEP131 NPB SIRT7 MIR4740 CD7 CCDC57 NOTUM MAFG-AS1 TBCD GPS1 UTS2R LOC105371925 CSNK1D LOC101929552 FSCN2 HGS FAAP100 ZNF750 LOC105371944 MIR3186 TSPAN10 ANAPC11 MIR6786 MIR6787 FN3K OXLD1 AATK TEPSIN ACTG1
nsv470620 Chr.17:81516973 - 82064485 on Build GRCh38 Loss MAFG SLC25A10 PYCR1 MRPL12 NPLOC4 STRA13 DUS1L PPP1R27 RAC3 CCDC137 MYADML2 NPB SIRT7 NOTUM GCGR MAFG-AS1 RFNG GPS1 ALYREF PCYT2 ARHGDIA FSCN2 HGS FAAP100 PDE6G P4HB ASPSCR1 TSPAN10 ANAPC11 MIR6786 ARL16 LRRC45 OXLD1 DCXR MCRIP1
nsv833569 Chr.17:81838937 - 82011412 on Build GRCh38 Loss MAFG PYCR1 P4HB ASPSCR1 ANAPC11 MYADML2 NPB SIRT7 NOTUM MAFG-AS1 ALYREF PCYT2 ARHGDIA
esv21913 Chr.17:81828123 - 83103548 on Build GRCh38 Gain+Loss HEXDC FASN B3GNTL1 SLC16A3 LOC105376790 PPP1R27 RAC3 RFNG ALYREF PCYT2 ARHGDIA NARF OGFOD3 P4HB ASPSCR1 SNORD134 METRNL FN3KRP WDR45B LRRC45 DCXR MCRIP1 MIR4525 SECTM1 MAFG LOC101929511 C17orf62 PYCR1 FOXK2 LOC105376791 STRA13 DUS1L RAB40B TEX19 MYADML2 NPB SIRT7 CD7 CCDC57 NOTUM MAFG-AS1 TBCD GPS1 UTS2R CSNK1D LOC101929552 ZNF750 LOC105371944 ANAPC11 MIR6787 FN3K

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