At02214729_g1

• Gene Symbol: AT1G60080
• Gene Name: 3'-5'-exoribonuclease family protein
• Gene Aliases: AT1G60080, T2K10.14, T2K10_14
• Chromosome Location: Chr.1: 22152230 - 22154643 on Build TAIR10.1
• Species: Arabidopsis
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: AT1G60080
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_104700.5	NP_176216.1	5 - 6	598		92
GenBank mRNA	AK227971.1	-	5 - 6	536		92
	BT004614.1	-	4 - 5	387		92

More Information

• Set Membership: Amplicon length between 86 and 100, Detect Genomic DNA, Arabidopsis thaliana, Probe spans exons

Panther Classification:

Molecular Function -

RNA metabolism protein, exoribonuclease, nucleic acid metabolism protein

Gene Ontology Categories:

Process(es)

exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
rRNA catabolic process
nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'
U1 snRNA 3'-end processing
U4 snRNA 3'-end processing
U5 snRNA 3'-end processing
exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay
nuclear mRNA surveillance
nuclear polyadenylation-dependent rRNA catabolic process
nuclear polyadenylation-dependent tRNA catabolic process
nuclear polyadenylation-dependent mRNA catabolic process

Function(s)

AU-rich element binding