Assay Details

Gene Symbol: SCUBE1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_173050.3	NP_766638.2	10 - 11	1336		104
	XM_005261752.1	XP_005261809.1	11 - 12	1387		104
	XM_011530389.2	XP_011528691.1	11 - 12	1381		104
	XM_011530390.2	XP_011528692.1	10 - 11	1266		104
GenBank mRNA	AF525689.1	-	11 - 12	1229		104
GenBank mRNA	BG901065.1	-		338		104

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC2200008907.hg.1
This assay targets the same location as HTA transcript cluster(s) TC22000861.hg.1

Set Membership:

Ambion siRNA available

Amplicon length greater than or equal to 101

Homo sapiens

Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene SCUBE1

Panther Classification:

Molecular Function -

extracellular matrix glycoprotein

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR22014556.hg.1	ENST00000360835.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR22014556.hg.1	NM_173050.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR22014556.hg.1	TC22000861.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000290460.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000290460.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000290460.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000290460.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000290460.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000290460.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000290460.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000290460.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000290460.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000290460.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000290460.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000449304.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000449304.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000449304.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000449304.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000449304.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000461595.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000461595.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000461595.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000461595.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000480833.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000480833.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000615096.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000615096.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000615096.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000615096.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000615096.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000615096.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000615096.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000615096.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000615096.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000615096.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	ENST00000615096.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	NM_173050.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	NM_173050.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	NM_173050.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	NM_173050.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	NM_173050.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	NM_173050.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	NM_173050.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	NM_173050.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	NM_173050.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	NM_173050.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	NM_173050.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	NM_173050.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	NM_173050.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	NM_173050.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	NM_173050.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	NM_173050.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	NM_173050.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	NM_173050.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	NM_173050.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	NM_173050.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	NM_173050.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	NM_173050.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	NM_173050.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	NM_173050.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	NM_173050.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	NM_173050.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	NM_173050.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC2200008907.hg.1	NM_173050.3	Refseq
Affymetrix Human Clariom D Assay	PSR2200164647.hg.1	TC2200008907.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR2200164647.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Clariom D Assay	PSR2200164647.hg.1	NM_173050.3	Refseq
Affymetrix Human Clariom D Assay	PSR2200164647.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Clariom D Assay	PSR2200164647.hg.1	NM_173050.3	Refseq
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000290460.7	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000290460.7	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000290460.7	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000290460.7	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000290460.7	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000290460.7	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000290460.7	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000290460.7	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000290460.7	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000290460.7	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000290460.7	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000360835.8	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000449304.5	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000449304.5	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000449304.5	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000449304.5	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000449304.5	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000461595.5	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000461595.5	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000461595.5	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000461595.5	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000480833.1	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000480833.1	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000615096.4	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000615096.4	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000615096.4	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000615096.4	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000615096.4	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000615096.4	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000615096.4	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000615096.4	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000615096.4	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000615096.4	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	ENST00000615096.4	Ensembl
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	NM_173050.3	Refseq
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	NM_173050.3	Refseq
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	NM_173050.3	Refseq
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	NM_173050.3	Refseq
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	NM_173050.3	Refseq
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	NM_173050.3	Refseq
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	NM_173050.3	Refseq
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	NM_173050.3	Refseq
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	NM_173050.3	Refseq
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	NM_173050.3	Refseq
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	NM_173050.3	Refseq
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	NM_173050.3	Refseq
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	NM_173050.3	Refseq
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	NM_173050.3	Refseq
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	NM_173050.3	Refseq
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	NM_173050.3	Refseq
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	NM_173050.3	Refseq
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	NM_173050.3	Refseq
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	NM_173050.3	Refseq
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	NM_173050.3	Refseq
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	NM_173050.3	Refseq
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	NM_173050.3	Refseq
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	NM_173050.3	Refseq
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	NM_173050.3	Refseq
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	NM_173050.3	Refseq
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	NM_173050.3	Refseq
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	NM_173050.3	Refseq
Affymetrix Human Clariom D Assay	TC2200008907.hg.1	NM_173050.3	Refseq

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Genomic Map