Mm03931960_g1

• Gene Symbol: 4933400F21Rik
• Gene Name: RIKEN cDNA 4933400F21 gene
• Gene Aliases: 1700091C04Rik, 4930565K10Rik
• Chromosome Location: Chr.1: 89676507 - 89683892 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: 4933400F21Rik
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_015540.1		3 - 4	449		101
GenBank mRNA	AK016592.1	-	3 - 4	451		101
	AK029704.1	-	3 - 4	454		101

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BB615358.1	-	3 - 4	449		Chr. 1 - 89679411 - 89683892 [-] on Build GRCm38	101

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	RIKEN cDNA C030007H22 gene	C030007H22Rik		-271.4kb	Sense	Chr. 1 - 89360342 - 89406133 on NCBI Build GRCm38
Downstream	gastrulation brain homeobox 2	Gbx2	D130058E05Rik, Gbx-2, MMoxA, Stra7	247.9kb	Sense	Chr. 1 - 89927962 - 89931176 on NCBI Build GRCm38

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0100002780.mm.1

• Set Membership: Amplicon length greater than or equal to 101, 3' Most, Detect Genomic DNA, Mus musculus, 1700, Probe spans exons

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Mouse Genome Microarray 4x44K v2	A_55_P2202184	AK141345.1	mouse_transcriptome
Agilent Whole Mouse Genome Microarray 4x44K v2	A_55_P2202184	AK029704.1	mouse_transcriptome
Agilent Whole Mouse Genome Microarray 4x44K v2	A_55_P2202184	NR_015540.1	mouse_transcriptome
Whole Mouse Genome G4122A	A_52_P668219	AK016592.1	mouse_transcriptome
Whole Mouse Genome G4122A	A_52_P668219	AK016229.1	mouse_transcriptome
Whole Mouse Genome G4122A	A_52_P668219	AK029704.1	mouse_transcriptome
Whole Mouse Genome G4122A	A_52_P668219	NR_015540.1	mouse_transcriptome
Whole Mouse Genome G4122A	A_52_P668219	AK007030.1	mouse_transcriptome
Agilent Mouse Developmental Microarray 44K G2519A Option 002	A_66_P106810	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix HT MG-430 PM Array Plate	1453652_PM_at	-	-
Affymetrix HT MG-430 PM Array Plate	1432390_PM_at	-	-
Mouse Genome 430 2.0 Array	1453652_at	-	-
Mouse Genome 430 2.0 Array	1453652_PM_at	-	-
Affymetrix Mouse Clariom S Array	PSR0100022483.mm.1	NR_015540.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0100022483.mm.1	NR_015540.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0100022483.mm.1	TC0100002780.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0100022480.mm.1	NR_015540.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0100022480.mm.1	NR_015540.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0100022480.mm.1	TC0100002780.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0100022482.mm.1	NR_015540.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0100022482.mm.1	NR_015540.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0100022482.mm.1	TC0100002780.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0100022484.mm.1	NR_015540.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0100022484.mm.1	NR_015540.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0100022484.mm.1	TC0100002780.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0100022481.mm.1	NR_015540.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0100022481.mm.1	NR_015540.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0100022481.mm.1	TC0100002780.mm.1	MTA TC
Mouse Expression Set 430	1453652_PM_at	-	-
Mouse Expression Set 430	1453652_at	-	-
Affymetrix HT Mouse Genome 430B Array	1453652_PM_at	-	-
Affymetrix HT Mouse Genome 430B Array	1453652_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	320098	-	-

Array Name	Probe IDs	Targets	Target Type
MouseWG-6 v2 Expression BeadChip	106940253	-	-
MouseWG-6 v2 Expression BeadChip	105360097	-	-