Rn00677137_g1

• Gene Symbol: Clcnka
• Gene Name: chloride channel, voltage-sensitive Ka
• Gene Aliases: Clcnk1
• Chromosome Location: Chr.5: 159931497 - 159946483 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Clcnka
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_053327.1	NP_445779.1	6 - 7	615		60
	XM_008764291.1	XP_008762513.1	6 - 7	731		60
	XM_008764292.1	XP_008762514.1	6 - 7	701		60
GenBank mRNA	BC081761.1	-	6 - 7	681	7108273	60
	D13927.1	-	6 - 7	615		60
	Z34291.1	-	5 - 6	572		60

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0500003956.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Ion Channel, Mammalian Gene Collection, Detect Genomic DNA, Rattus norvegicus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Clcnka

Panther Classification:

Molecular Function -

ion channel

Gene Ontology Categories:

Process(es)

kidney development
chloride transport
body fluid secretion
response to pH
response to water deprivation
ion transmembrane transport
regulation of ion transmembrane transport
regulation of anion transport
regulation of body fluid levels
response to calcium ion
renal inner medulla development
chloride transmembrane transport

Function(s)

voltage-gated ion channel activity
voltage-gated chloride channel activity
chloride channel activity
metal ion binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR0500029872.rn.1	TC0500003956.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0500029870.rn.1	TC0500003956.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0500029873.rn.1	TC0500003956.rn.1	RTA TC