Rn01518389_m1 Best Coverage

• Gene Symbol: Alkbh1
• Gene Name: alkB, alkylation repair homolog 1 (E. coli)
• Gene Aliases: Alkbh
• Chromosome Location: Chr.6: 111456096 - 111476783 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Alkbh1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001108718.1	NP_001102188.1	2 - 3	307		68
	XM_006240394.2	XP_006240456.1	2 - 3	313		68

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0600002915.rn.1

• Set Membership: Amplicon length less than or equal to 70, Recommended Assay, Rattus norvegicus, Probe spans exons

Panther Classification:

Molecular Function -

DNA metabolism protein, nucleic acid metabolism protein

Gene Ontology Categories:

Process(es)

DNA catabolic process, endonucleolytic
in utero embryonic development
neuron migration
placenta development
DNA repair
DNA dealkylation involved in DNA repair
regulation of gene expression
cell differentiation
neuron projection development
RNA repair
negative regulation of neuron apoptotic process
developmental growth
positive chemotaxis
oxidative demethylation
DNA demethylation

Function(s)

DNA-(apurinic or apyrimidinic site) lyase activity
ferrous iron binding
chemoattractant activity
methylcytosine dioxygenase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR0600020710.rn.1	TC0600002915.rn.1	RTA TC