Rn01533583_m1 Best Coverage

• Gene Symbol: Ciart
• Gene Name: circadian associated repressor of transcription
• Gene Aliases: RGD1566380
• Chromosome Location: Chr.2: 197987705 - 198003082 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Ciart
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	XM_008761317.1	XP_008759539.1	3 - 4	416		73
	XM_008761318.1	XP_008759540.1	4 - 5	371		73
	XM_008761319.1	XP_008759541.1	4 - 5	371		73
	XM_008761320.1	XP_008759542.1	3 - 4	194		73

More Information

Additional Information:

This assay is in the 5'UTR region of the XM_008761317.1 transcripts.

• Set Membership: Amplicon length between 71 and 85, 3' Most, Recommended Assay, Rattus norvegicus, Probe spans exons

Panther Classification:

Molecular Function -

DNA-binding transcription factor

Gene Ontology Categories:

Process(es)

circadian regulation of gene expression
locomotor rhythm
negative regulation of transcription, DNA-templated

Function(s)

core promoter sequence-specific DNA binding
E-box binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P687053	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P687053	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P687053	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P687053	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P687053	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10825095	-	-
Affymetrix Rat Gene 1.0 ST Array	10825096	-	-
Affymetrix Rat Gene 1.0 ST Array	10825098	-	-
Affymetrix Rat Gene 1.0 ST Array	10825097	-	-
Affymetrix Rat Gene 1.0 ST Array	10825094	-	-