Rn01764649_g1

• Gene Symbol: Ccl21
• Gene Name: chemokine (C-C motif) ligand 21
• Gene Aliases: Ccl21b
• Chromosome Location: Chr.5: 58197678 - 58198782 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Ccl21
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001008513.1	NP_001008513.1	1 - 2	115		95
GenBank mRNA	BC086571.1	-	1 - 2	115	7304213	95
	FQ218040.1	-	1 - 2	139		95
	FQ220091.1	-	1 - 2	139		95
	FQ223815.1	-	1 - 2	141		95
	FQ225478.1	-	1 - 2	139		95
	FQ226079.1	-	1 - 2	137		95
	FQ233622.1	-	1 - 2	139		95

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0500002590.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Mammalian Gene Collection, Detect Genomic DNA, Rattus norvegicus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Ccl21

Panther Classification:

Molecular Function -

cytokine, intercellular signal molecule

Gene Ontology Categories:

Process(es)

establishment of T cell polarity
positive regulation of cell-matrix adhesion
dendritic cell chemotaxis
immune response
G-protein coupled receptor signaling pathway
positive regulation of actin filament polymerization
positive regulation of pseudopodium assembly
ruffle organization
positive regulation of cell adhesion mediated by integrin
response to prostaglandin E
mesangial cell-matrix adhesion
positive regulation of I-kappaB kinase/NF-kappaB signaling
positive regulation of phosphatidylinositol 3-kinase activity
positive regulation of protein kinase activity
positive regulation of JNK cascade
release of sequestered calcium ion into cytosol
positive regulation of filopodium assembly
positive regulation of protein kinase B signaling
cell chemotaxis
positive regulation of ERK1 and ERK2 cascade
positive regulation of neutrophil chemotaxis
negative regulation of leukocyte tethering or rolling
negative regulation of leukocyte apoptotic process
positive regulation of cell motility
positive regulation of T cell migration
positive regulation of myeloid dendritic cell chemotaxis

Function(s)

chemokine activity
chemokine receptor binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Clariom S Assay	PSR0500019147.rn.1	TC0500002590.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0500019148.rn.1	TC0500002590.rn.1	RTA TC