C_338819251_10

SNP ID:

rs758410732

Gene

SPATA2L VPS9D1 VPS9D1-AS1

Gene Name

spermatogenesis associated 2 like

VPS9 domain containing 1

VPS9D1 antisense RNA 1

Set Membership:

-

Chromosome Location:

Chr.16: 89709799 - 89709799 on Build GRCh38

Polymorphism:

G/A, Transition substitution

Context Sequence [VIC/FAM]:

TACCTGTACAGGGCCAGCAGCAGAG[G/A]CCACAGCGGGGAGAAAAAGGGTTCC

Assay Details

Species:	Human
dbSNP Submissions:	NA
Phenotype:
Literature Links:	SPATA2L PubMed Links
Allele Nomenclature:
Minor Allele Frequency:

1000Genome	Applied Biosystems^®	HapMap
Global - Not Available	Caucasian - Not Available	CEPH (CEU) - Not Available
EAS - Not Available	African American - Not Available	YRI (Yoruba) - Not Available
SAS - Not Available	Chinese - Not Available	CHB (Han Chinese) - Not Available
AFR - Not Available	Japanese - Not Available	JPT (Japanese) - Not Available
EUR - Not Available
AMR - Not Available

SPATA2L - spermatogenesis associated 2 like
There are no transcripts associated with this gene.

VPS9D1 - VPS9 domain containing 1
Transcript Accession	SNP Location	SNP Type	Observed Codons	Observed Amino Acid	Protein ID
NM_004913.2	3364	Missense Mutation	CCT,TCT	P,S 456	NP_004904.2
XM_005256329.4	3364	Missense Mutation	CCT,TCT	P,S 457	XP_005256386.1
XM_005256330.4	3364	Missense Mutation	CCT,TCT	P,S 387	XP_005256387.1
XM_005256331.2	3364	Missense Mutation	CCT,TCT	P,S 291	XP_005256388.1
XM_006721350.2	3364	Missense Mutation	CCT,TCT	P,S 457	XP_006721413.1
XM_011523476.2	3364	Missense Mutation	CCT,TCT	P,S 456	XP_011521778.1
XM_011523477.2	3364	Missense Mutation	CCT,TCT	P,S 423	XP_011521779.1
XM_011523478.2	3364	Missense Mutation	CCT,TCT	P,S 422	XP_011521780.1
XM_011523479.2	3364	Missense Mutation	CCT,TCT	P,S 457	XP_011521781.1
XM_011523480.2	3364	Missense Mutation	CCT,TCT	P,S 387	XP_011521782.1

VPS9D1-AS1 - VPS9D1 antisense RNA 1
There are no transcripts associated with this gene.

More Information

Panther Classification:

Molecular Function -

guanyl-nucleotide exchange factor

Gene Ontology Categories:

Process(es)

ATP synthesis coupled proton transport
positive regulation of GTPase activity

Function(s)

GTPase activator activity
transporter activity