HSS177422

Gene Symbol:

TARDBP LOC643387

Gene Name:

TAR DNA binding protein

TAR DNA binding protein pseudogene

Gene Aliases:

ALS10, TDP-43

-

Chromosome Location:

Chr.1: 11012622 - 11030528 on Build GRCh38

Chromosome Location:

Chr.2: 238231686 - 238234345 on Build GRCh38

UniGene ID:

Hs.300624

Hs.598359

Species:

Human

Species Specific ID (Flybase ID):

-

-

siRNA Details

Gene Symbol: TARDBP
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
RefSeq	NM_007375.3	NP_031401.1	2	183
	XM_017000863.1	XP_016856352.1	2	171
	XM_017000864.1	XP_016856353.1	2	171
	XM_017000865.1	XP_016856354.1	2	171
	XM_017000866.1	XP_016856355.1	2	171
	XM_017000867.1	XP_016856356.1	2	171
	XM_017000868.1	XP_016856357.1	2	171
GenBank mRNA	AK222754.1	-	2	121
	AK295920.1	-	2	121
	AK312416.1	-	2	151
	AL050265.1	-	2	137
	BC001487.2	-	2	136
	BC071657.1	-	2	134	5498250
	BC095435.1	-	2	135	30389805
	BI464234.1	-	2	188
	CD703666.1	-	2	209
	CR533534.1	-	1	49
	EF434181.1	-	1	49
	EF434182.1	-	1	49
	EF434183.1	-	1	49
	HQ628633.1	-	1	49
	HQ628634.1	-	1	49
	HQ628635.1	-	1	49
	HQ628636.1	-	1	49
	HQ628637.1	-	1	49
	U23731.1	-	1	49

Gene Symbol: LOC643387
Interrogated Sequence		Translated Protein	Targeted Exon(s)	siRNA Location	IMAGE Clone ID
RefSeq	NR_026923.1		1	244
GenBank mRNA	BX280126.1	-	1	244
	DA170867.1	-	1	131

More Information

Gene Ontology Categories:

Process(es)

negative regulation of protein phosphorylation
transcription from RNA polymerase II promoter
mRNA processing
RNA splicing
negative regulation of gene expression
nuclear fragmentation involved in apoptotic nuclear change
positive regulation of insulin secretion
response to endoplasmic reticulum stress
negative regulation by host of viral transcription
positive regulation of transcription from RNA polymerase II promoter
regulation of cell cycle
3'-UTR-mediated mRNA stabilization
nuclear inner membrane organization

Function(s)

nucleotide binding
transcriptional activator activity, RNA polymerase II distal enhancer sequence-specific binding
double-stranded DNA binding
transcription factor activity, sequence-specific DNA binding
RNA binding
mRNA 3'-UTR binding
protein binding
identical protein binding
poly(A) RNA binding