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See other SOX11A GE Assays ›
Gene Symbol:
sox11a
Gene Name:
SRY-box transcription factor 11a
Gene Aliases:
cb237, id:ibd2104, wu:fb16g02, zgc:136533
Chromosome Location:
Chr.17: 35878547 - 35881807 on Build GRCz11
Species:
Zebrafish
Species Specific ID (Flybase ID):
-
Assay ID Dr03105701_s1
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Catalog # 4351372
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Gene Symbol: sox11a
Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
RefSeq NM_131336.1 NP_571411.1 1 945 102
GenBank mRNA AJ237812.1 - 1 945 102
BC115164.1 - 1 971 102
BC139605.1 - 1 951 102
BC164369.1 - 1 905 102
U85090.1 - 1 910 102

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More Information


Set Membership:

Amplicon length greater than or equal to 101 3' Most Mammalian Gene Collection Detect Genomic DNA Recommended Assay Danio rerio Both primers and probe map within a single exon

Panther Classification:

Molecular Function -

HMG box transcription factor

Gene Ontology Categories:

Function(s) Process(es)

negative regulation of transcription from RNA polymerase II promoter
lens development in camera-type eye
regulation of transcription, DNA-templated
brain development
anatomical structure morphogenesis
cell differentiation
neuron differentiation
negative regulation of smoothened signaling pathway
positive regulation of transcription from RNA polymerase II promoter
retinal rod cell development
camera-type eye morphogenesis
closure of optic fissure
RNA polymerase II core promoter proximal region sequence-specific DNA binding
RNA polymerase II transcription factor activity, sequence-specific DNA binding
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding
DNA binding
transcription factor activity, sequence-specific DNA binding

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